Shewanella denitrificans: Sden_0095
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Entry
Sden_0095 CDS
T00344
Name
(GenBank) chorismate lyase
KO
K03181
chorismate lyase [EC:
4.1.3.40
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00130
Ubiquinone and other terpenoid-quinone biosynthesis
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
sdn01240
Biosynthesis of cofactors
Module
sdn_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
sdn_M00989
Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
Sden_0095
Enzymes [BR:
sdn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.40 chorismate lyase
Sden_0095
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Chor_lyase
UTRA
Rv2949c-like
Motif
Other DBs
NCBI-ProteinID:
ABE53392
UniProt:
Q12T34
LinkDB
All DBs
Position
complement(107359..107928)
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AA seq
189 aa
AA seq
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MKVTSLSFPYGESIQWFSPERADSIQNAQLKDWLLATGSLTLKLKNLCNDFEVKVLGEQL
TSPLATDTMIEETVWMREVLLCLDGTPWVFARTLVPQSLLDFKSQAFTQLGNKPLGELLY
TSPEIIPGKIELAKFDTCSRLAKLATSLKQEISDPLWGRRRHFSIDTRHLTVSEIFLPAA
VAHMKLHNK
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgactagtcttagcttcccttatggtgaatcaattcagtggttttcaccagaa
agagccgattctattcaaaatgctcaattaaaagactggttattggccactggcagtttg
actctcaagctaaaaaacctctgtaacgactttgaagtgaaagtgctaggagagcaatta
acctcacctttagcaacagatactatgattgaagaaacagtatggatgcgtgaagtcttg
ctttgtctagatggtacaccttgggtatttgcccgcaccttagtgcctcagtcgctactc
gattttaaatcccaagcctttactcaattaggcaataagcccttgggagagctgttatac
actagccctgaaattatcccagggaaaatagagctggcaaagtttgatacctgtagcagg
ttggcaaaattagccacatcattaaaacaagagattagcgaccccctttggggtcgaaga
cgccatttcagtattgatacacgtcatcttaccgttagtgagatatttcttcccgccgca
gtcgcacacatgaagctgcataataaataa
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