Shewanella denitrificans: Sden_0826
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Entry
Sden_0826 CDS
T00344
Name
(GenBank) malate dehydrogenase (NAD)
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00020
Citrate cycle (TCA cycle)
sdn00270
Cysteine and methionine metabolism
sdn00620
Pyruvate metabolism
sdn00630
Glyoxylate and dicarboxylate metabolism
sdn00680
Methane metabolism
sdn00710
Carbon fixation by Calvin cycle
sdn00720
Other carbon fixation pathways
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
sdn01120
Microbial metabolism in diverse environments
sdn01200
Carbon metabolism
Module
sdn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sdn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sdn_M00012
Glyoxylate cycle
sdn_M00168
CAM (Crassulacean acid metabolism), dark
sdn_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Sden_0826
00620 Pyruvate metabolism
Sden_0826
00630 Glyoxylate and dicarboxylate metabolism
Sden_0826
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
Sden_0826
00720 Other carbon fixation pathways
Sden_0826
00680 Methane metabolism
Sden_0826
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Sden_0826
Enzymes [BR:
sdn01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
Sden_0826
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
ABE54115
UniProt:
Q12R11
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All DBs
Position
947352..948287
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AA seq
311 aa
AA seq
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MKVAVLGAAGGIGQALALLLKTQLPAGSKLSLYDIAPVTPGVAVDLSHIPTAVEIKGFAG
EDPTPALVDADVVLISAGVARKPGMDRSDLFNINAGIVRNLMEKVAATCPKALVGIITNP
VNTTVAIAAEVMKKAGVYDKNRLFGVTTLDVIRSETFIAELKGLNVADVNINVIGGHSGV
TILPLLSQVKGVSFTDEEVAALTKRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVR
GLQGEANVVECAYVDGGSEHAQFFAQPILLGKNGVEKVMPYGEVSAFEANARDAMLDTLN
ADIKLGVEFVK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgccgttcttggtgctgctggcggtattggccaggcattagctttattgtta
aaaactcaactgcctgcgggttctaagttgtctctgtatgatatcgcacctgttactcca
ggtgttgcagtggacctaagccacataccaacagccgttgaaatcaaaggttttgccggt
gaagatcccactccagccctcgtcgatgctgatgtagtgttaatctctgcaggtgttgcc
cgtaagccgggtatggaccgttctgatttattcaacatcaacgccggtatcgtgcgtaac
ctaatggaaaaagtggcagcaacttgccctaaagccttagtgggtattatcactaaccca
gtgaacaccacagtggctattgccgctgaagtgatgaaaaaagccggtgtttacgataag
aaccgtttattcggtgtgactacccttgatgttatccgctctgaaaccttcatcgctgaa
ttaaaaggcctgaatgttgctgacgtgaacatcaatgtgatcggcggccacagcggcgtg
actattctgccattattgtctcaagttaagggcgtaagcttcacagatgaagaagttgct
gcgttaactaagcgtatccagaacgcgggcactgaagtggttgaagctaaagccggtggc
ggcagcgcaactttatctatggggcaagccgcttgtcgtttcggcctgtctttagttcgt
ggtcttcaaggtgaagcgaacgtggttgaatgtgcctatgtcgatggcggcagtgaacac
gctcagttcttcgcacagcccatacttcttggtaagaatggcgttgaaaaagtcatgcct
tatggtgaagtcagtgcattcgaagctaacgctcgcgatgccatgttagacacgctaaat
gctgatatcaaactgggtgttgaattcgttaagtaa
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