KEGG   Shewanella denitrificans: Sden_1115
Entry
Sden_1115         CDS       T00344                                 
Name
(GenBank) methionine synthase (B12-dependent)
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
sdn  Shewanella denitrificans
Pathway
sdn00270  Cysteine and methionine metabolism
sdn00450  Selenocompound metabolism
sdn00670  One carbon pool by folate
sdn01100  Metabolic pathways
sdn01110  Biosynthesis of secondary metabolites
sdn01230  Biosynthesis of amino acids
sdn04981  Folate transport and metabolism
Module
sdn_M00017  Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:sdn00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    Sden_1115
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    Sden_1115
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    Sden_1115
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    Sden_1115
   04980 Cobalamin transport and metabolism
    Sden_1115
Enzymes [BR:sdn01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     Sden_1115
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding
Other DBs
NCBI-ProteinID: ABE54403
UniProt: Q12Q73
LinkDB
Position
complement(1280183..1283908)
AA seq 1241 aa
MATAAHSTTLVQLTELLAQRIVMLDGAMGTMIQDYKLEEADYRGQRFKDWHCDVKGNNDL
LVLSQPQIIKQIHLDYLLAGSDIIETNTFNATTIAMADYDMQALAAEINQVGARLAREAA
DEISTQTGIRRYVAGVLGPTNRTCSISPDVNDPSFRNVSFDQLVKAYLESSLALIQGGAD
IIMVETIFDTLNAKAALFAIEKAFDVLGERLPVMVSGTITDASGRTLTGQTTEAFYNSLR
HIKPISIGLNCALGPKELRPYVEELARISETYISVHPNAGLPNEFGGYDETPAEMAEILA
QWAEEGLVNIVGGCCGSTPAHIRAIAEAVDKFDARALPDIAIACRLSGLEPLTIDSNSLF
VNVGERANVTGSAKFLRLIKEEKFEEALDVVREQVENGAQIIDVNMDEGMLDGVAAMSQF
LNLIASEPDISRVPIMIDSSKWEVIEAGLKCVQGKAIVNSISMKEGEAAFIKQATLVKRY
GAAAIVMAFDEDGQADTRKRKTEICTRAYRLLVDVVGFPPEDIIFDPNIFAIATGIDEHD
NYAVDFIESIKDIKANLPHAMISGGVSNVSFSFRGNNPVREAIHAVFLYHAIQAGMDMGI
VNAGQLAIYDDIDPELKLRVENVVRNLPCPVADSSNTEQLLEIAEQFRGDGSQEVKKEDS
AWRSLPVAERLSYALVKGITEFIDEDTEAARLESVRPLDVIEGPLMNGMNVVGDLFGSGK
MFLPQVVKSARVMKKAVAYLNPYIELEKVEGQSNGKILMVTVKGDVHDIGKNIVGVVLAC
NGYEVIDLGVMVSIEKIIEVARAEKVDIIGMSGLITPSLDEMVHNVKTLIREGLSLPVII
GGATCSKIHTAVKIAPHYPPGAIYIADASRAVPMVAKLIGNQTRQDTIDATYVEYQEMRE
KRLSQTKRKTITSLAKARENRCQHDWQDYTPVKPKILGRQVFEDYPLSDLVERIDWTPFF
RSWELHGRYPEILNDKIVGVEAQKLFEDGKAMLEQIISEKWLTAKAVIGLFPANTVNFDD
IELYACDGTDEDRSQPIMTTHHLRMQLERVGNDNFCLADFVAPKDSGVADYMGGFAVTAG
HGIDEHVARFEANHDDYSAIMLKCLADRLAEAFAERMHERVRKEFWGYAADETLDNEALI
REKYKGIRPAPGYPACPDHTEKGLLWELLKPDETIGLNITESYAMFPTAAVSGWYFAHPK
SRYFGVTNIGRDQVEDYAARKGMSVTETERWLAPVLDYDPE
NT seq 3726 nt   +upstreamnt  +downstreamnt
atggccacagcagcacacagcactaccttagtccaactcactgaattattagcacagcgc
atagtgatgctggatggcgccatgggtaccatgatccaagactacaagctggaagaagca
gattatcgcggccagcgctttaaggattggcactgcgatgtcaaaggtaacaatgactta
ttggtgttgagtcagccgcaaatcatcaaacaaattcacctagattacctgctcgctggc
agtgacatcatagaaaccaacacctttaacgccaccactatcgccatggccgactatgac
atgcaggcattggcggctgaaatcaaccaagtgggcgcccgccttgcacgggaagctgcc
gatgaaattagcacgcaaactggcattcgccgttatgttgctggggtccttgggcccacc
aaccgcacttgctccatcagcccagatgtgaacgacccaagctttcgcaatgtgagtttc
gatcaactcgttaaggcctatcttgagtccagcttagccttaatccaaggcggcgccgac
atcatcatggtggaaaccatattcgataccttaaacgccaaggcggcgctgtttgccatc
gaaaaagccttcgatgttttaggtgagcgcttacctgtgatggtgtctggcacgataacg
gatgcctcgggccgtactctcacagggcaaaccacagaggccttttataactcactgcgt
cacattaagcccatttccatcggccttaattgcgccctagggccaaaagagctgcgccct
tatgtcgaagagttagcaagaatttcagaaacctatatttcagttcaccctaacgctggc
ctgcccaatgagtttggcggctatgatgaaaccccagcggaaatggctgaaattctcgct
caatgggccgaagaagggctggtgaatatcgttggcggttgctgcggcagtactccagct
cacattcgcgctatcgcagaggcggtagataaattcgatgccagagccttgcctgatatt
gccatcgcctgccgcttatctggccttgagcccttgaccatagacagtaactccttattc
gtgaacgtgggcgagcgcgccaatgtgacaggctctgccaagtttttgcgcttaattaaa
gaagagaaattcgaagaagccttagatgtggtgcgtgagcaagtggaaaacggcgcccag
atcatcgacgtcaacatggatgaaggcatgctagatggcgtggcggccatgagtcagttt
ttaaacttaattgcctctgagcccgatatctcacgggtgcccatcatgattgactcctcc
aaatgggaggtcatagaagccgggcttaagtgcgtgcaaggcaaggccatagtcaactcc
atttccatgaaagaaggcgaagctgcctttatcaaacaggccaccttagtgaagcgctat
ggcgccgccgctatcgtgatggcgtttgatgaagacggtcaggcagacacccgcaagcgt
aaaaccgagatttgcacccgcgcctatcgcctcttggtggatgtggtgggcttccctccc
gaagacattatttttgaccctaatattttcgccatcgccaccggcatcgatgaacacgat
aactacgcggtggactttatcgagtccatcaaagacattaaggcgaacctaccccatgcg
atgatttccggcggcgtctccaacgtgtccttctcatttcgtggcaataatccggtgcgc
gaagccatacacgccgtgtttttataccacgccattcaagcgggcatggacatgggcata
gttaacgccggtcaattggcgatttatgatgatatcgacccagagcttaaactcagggtc
gaaaacgtggtgcgcaacttaccttgcccagtggcggactccagtaacacagagcaatta
ttagaaatcgccgagcagtttcgcggcgatggcagtcaagaggtcaaaaaagaggactca
gcctggcgcagtttgccggtggcagagcgcttatcttatgccttagtgaaaggcatcaca
gaatttatcgatgaggacacagaagctgcacgccttgagtccgtgcggccactggacgtc
atcgaaggccccttgatgaatggcatgaatgtggtgggcgacttatttggctcgggcaag
atgttcctgccgcaagtggtcaagtccgcacgggtaatgaaaaaagccgtggcctactta
aacccctatattgagcttgaaaaggttgagggtcagtccaacggcaaaatcttgatggtg
acggtaaaaggcgatgtgcacgacataggcaagaatattgtcggcgtggtattggcctgt
aacggttatgaggttatagaccttggggtcatggtctccattgagaaaatcatcgaggta
gcacgggctgaaaaggtcgacatcatcggcatgtctgggcttatcaccccaagcttggat
gaaatggtgcacaacgtaaaaaccttaattcgcgagggcttaagcctgccggttatcata
ggcggcgccacttgctcaaaaattcataccgcagtgaaaatcgccccgcattatccccct
ggcgccatttatattgccgatgcctcccgcgctgtgcccatggtggcaaagctgattggc
aatcaaactcggcaagacactatcgatgccacctatgtggaataccaagagatgcgcgaa
aagcgtttatcgcaaactaagcgtaaaaccatcacaagccttgctaaagcgcgggaaaac
cgctgccaacacgactggcaagattacaccccggttaagcctaaaatactgggccgccaa
gtgtttgaagattatccgttaagcgatttagttgagcgtatcgattggacaccgtttttc
agaagttgggagctccatggccgttatcctgaaattttaaacgacaaaatcgtcggcgtt
gaagcccaaaagctgtttgaggatggcaaagccatgctagaacaaatcatcagtgagaag
tggctcaccgccaaggcggtcattgggctgtttcccgccaatacagtgaactttgatgat
atcgagctatacgcgtgtgacggcactgatgaagaccgaagccagcctatcatgaccacc
catcatctacggatgcagcttgagcgtgtgggcaatgataacttttgcctcgccgatttt
gtcgcgccaaaagactctggggttgccgattacatgggcgggtttgcggtcaccgcaggt
cacggtattgatgagcatgtggcccgctttgaggccaatcacgatgactacagcgccatc
atgcttaagtgcttggctgacagattagcagaagcctttgcagaaagaatgcacgagcgg
gtgcgtaaagaattctggggttacgcagccgatgaaaccttagataacgaagcgttaatt
cgcgagaaatacaagggcatacgccccgcacccggctacccggcatgtcctgatcacact
gaaaaaggcttgttatgggagctgctcaaacccgatgaaacgatagggctcaatatcacc
gaaagctacgccatgttccccactgcagcggtgtccggttggtacttcgcccaccccaaa
tcccgctacttcggcgtcaccaacataggtcgcgatcaagtggaagactacgcagcccgt
aagggtatgagcgtcacagaaaccgaacgctggttagcaccagtgctagactatgatcct
gagtaa

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