Shewanella denitrificans: Sden_2723
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Entry
Sden_2723 CDS
T00344
Name
(GenBank) Isoleucyl-tRNA synthetase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sden_2723
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdn01007
]
Sden_2723
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdn03016
]
Sden_2723
Enzymes [BR:
sdn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
Sden_2723
Amino acid related enzymes [BR:
sdn01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Sden_2723
Transfer RNA biogenesis [BR:
sdn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Sden_2723
Prokaryotic type
Other AARSs
Sden_2723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
ABE56002
UniProt:
Q12KM4
LinkDB
All DBs
Position
complement(3259737..3262568)
Genome browser
AA seq
943 aa
AA seq
DB search
MGSMSDYKFTLNLPETEFPMRGNLANREPEMLTRWTQDGLYQQIRDSRLGRKPFILHDGP
PYANGSIHIGHSVNKILKDIIIKSKTMSGFDAPYIPGWDCHGLPIELKVEQKVGKPGIKI
SAAEFREECRKYAATQVDGQRDDFIRLGVLGDWNNPYLTMDFSTEANIVRSLAKVIESGH
LHKGVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFSAVDSAAVAAKFGVANYASTVSM
VIWTTTPWTMPANRALALSADLDYSLVEFTKEGVTKTLILAQVLVESCLERFGAESHTIL
GETKGAELELMRFNHPFYAFDVPAIVADHVTTDAGTGIVHTAPGHGQDDFVVGQKYGLEV
ANPVGDNGVYKADTEVFAGQHVFKANANIVTLLEEKGALLNHVAYRHSYPHCWRHKSPII
FRATPQWFISMDNKGLRSQALSEIEKTKWIPDWGQSRIEKMVENRPDWCISRQRTWGVPI
TLFVNRETEELHPDSVALMERVAHRIEQQGIQAWWDLDDAELLGDEAPLYRKVTDTLDVW
YDSGSSFSTVVASRPEFHGHEVDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGF
TVDGKGRKMSKSVGNVIAPLHVTNKLGADILRLWVAATDYSGEMTVSDEILNRSADAYRR
IRNTARFLLANLNGFNPETDMVASEDMVALDRWVVRRAAALQQEIIESYDQYNFHNVTQK
LMQFCSVELGSFYLDIIKDRQYTAKQEGHARRSCQSALFHIAEAMVRWMTPILSFTADEV
WQLLPGKRDKYVFTQEWYQGLEAVTLDTDLSDAYWQQLLSVRNEVNKVLEQARRDKRIGG
ALEAEVTLFADANLSSALARVGDELRFVLLTSKATVAELSTAPADAIDTEISALKLLVAK
SEAQKCDRCWHHREEVSTIEAHPSLCQRCVTNIEGEGEKREFA
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgggatcaatgagcgactataaatttactttgaatttgccggaaactgagtttccgatg
cgtggtaatttggcaaatcgcgagccagaaatgttaactcgctggacgcaagacggactg
tatcaacagatccgtgacagccgccttggccgcaagcctttcattttgcatgatggccct
ccttatgcgaatggcagcattcatattggtcactcagttaacaaaattctgaaagatatc
attattaagtctaaaaccatgtcaggttttgacgccccttatatcccaggttgggattgt
cacggtttgcccattgaattaaaagttgagcaaaaagtcggtaagcctggaattaaaatc
tctgcggcagaatttcgtgaagagtgtcgtaaatatgcggcaactcaagtggatggccaa
cgtgatgactttatccgtttaggggtattaggggattggaataatccgtatttaaccatg
gatttttcaaccgaagctaacatagttcgctcccttgccaaggtgattgaatcaggccat
ttgcacaaaggtgttaagcctgtgcactggtgtaccgattgtggttcagcccttgctgaa
gctgaagttgaatacgaagacaaaacttcaccggctatcgatgtggcatttagcgctgta
gacagcgctgccgtagccgccaaatttggtgtggctaattatgccagtacagtgtccatg
gttatttggactacaacgccttggactatgcctgctaaccgcgcgctagccttaagtgct
gatttagattacagcctagtggaattcactaaagagggcgtgactaagacgctaatcttg
gctcaagtgttagtcgagtcatgccttgagcgctttggtgctgaatcacacactatttta
ggtgagactaaaggcgcagagcttgagttaatgcgctttaaccacccattctatgccttt
gatgtgcctgcgattgttgccgaccatgtcactacagatgcgggtacgggtattgtccat
actgcgccaggtcacggtcaagacgacttcgtagtgggtcaaaaatacggtttagaggtc
gcaaaccctgtgggtgataacggcgtttataaagccgacactgaagtctttgccggacaa
cacgtatttaaagctaacgcgaatatcgtgacgctactggaagaaaaaggcgcactactt
aatcacgtggcttatcgtcacagctatccacattgctggcgtcacaagtcaccgatcatc
ttccgtgccacaccgcagtggtttatctctatggataacaaaggattgcgcagccaagcc
ttaagcgaaatcgagaagactaaatggatcccagattggggccagagccgcatcgaaaaa
atggttgagaatcgtcctgactggtgtatttcacgtcagcgtacctggggcgtgcccatt
acgttattcgtaaaccgcgaaaccgaagaattgcacccagatagtgtggcgttgatggag
cgcgttgcacatcgcatcgaacagcaaggtattcaagcctggtgggatctggatgacgcc
gagctattaggcgatgaagcgccgctttaccgtaaagtgaccgacaccttagatgtgtgg
tatgactcagggtcaagcttctcaactgtggttgcttcacgccctgaatttcatggtcat
gaagtggatttgtaccttgaaggtagcgatcagcacagaggctggtttatgtcatctttg
atgatttcaaccgccatgaatggcaaagcgccttacaagcaagtactgacgcatggcttt
accgttgatggtaaaggccgcaagatgtcaaaatccgtgggtaacgtgattgcgccttta
catgtgaccaataaactcggtgccgacattttgcgtttatgggttgctgcgacagattac
agcggtgaaatgacggtttctgatgagattcttaaccgcagcgccgatgcctatcgccgc
atccgtaacacggcgcgtttcttattagctaacttaaacggtttcaatcctgaaactgat
atggttgccagtgaagacatggtggcgttagatcgctgggttgtgcgccgcgcagctgcg
ctgcagcaagagatcatcgagtcttacgatcaatataacttccacaacgtgactcaaaag
ctgatgcagttctgttcggttgagctgggcagtttctaccttgatatcatcaaggacaga
caatataccgctaagcaagaaggtcatgcccgtcgtagttgtcaatcggcattattccac
atcgctgaagctatggtacgttggatgacaccaatcctaagctttactgccgatgaagtg
tggcagttattgccaggtaagcgtgataaatacgtgttcactcaagagtggtatcagggt
ttagaagctgtcaccttagatacagatttaagcgatgcctattggcagcaattgctttct
gtgcgtaatgaagtcaacaaggtactggagcaggcacgtcgtgataaacgcattggcggt
gcactagaagcggaagtcaccttgtttgccgatgcaaacttaagctcagcccttgccaga
gtcggtgacgaattgcgttttgtgttattgacctcaaaagcgacagtggctgaactttct
actgcgccagcagatgctatcgacactgagataagtgcgcttaaattattggtcgccaag
agcgaagcgcaaaagtgcgatcgctgctggcatcacagagaggaagtgagcaccattgaa
gctcatccaagtctgtgtcagcgctgtgtaaccaacatcgaaggtgaaggtgagaaacgt
gaattcgcctaa
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