Shewanella denitrificans: Sden_3080
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Entry
Sden_3080 CDS
T00344
Name
(GenBank) Hydrophobe/amphiphile efflux-1 HAE1
KO
K18299
multidrug efflux pump
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdn02000
]
Sden_3080
01504 Antimicrobial resistance genes [BR:
sdn01504
]
Sden_3080
Transporters [BR:
sdn02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Sden_3080
Antimicrobial resistance genes [BR:
sdn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
Sden_3080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Sdh_cyt
Motif
Other DBs
NCBI-ProteinID:
ABE56358
UniProt:
Q12JL8
LinkDB
All DBs
Position
3698545..3701781
Genome browser
AA seq
1078 aa
AA seq
DB search
MFSQFFIKRPIFAAVISLMFFIAGAIAVWKLPITEYPEVVPPTVVVTASYPGANPKVIAQ
TVASPLEQEINGVEDMLYMSSQATSDGLMTLTITFAIGTDVDRAQTQVQARVDRASPRLP
QEVQRLGIVTEKSSPDLTMVVHLTSPDKRYDMLYLSNYAALNVKDELARIEGVGAVRLFG
AGEYSLRIWLEPNKMAGLNLSPAQVLAAVREQNQQAAAGSLGAQPSGGADFQLLINVKGR
LSTVEEFEDIIINVGPQGELSRLRDVARVELGASTYALRSLLDNQDAIAIPVFQASGSNA
IQISDDVRAKMSELSASFPDGLSYDIVYDPTVFVRGSIEAVVKTLFEAILLVVLVVVLFL
QTWRASIIPLVAVPVSLVGTFAFMHLLGFSLNALSLFGLVLAIGIVVDDAIVVVENVERN
IGDGLSPIAATQKAMREVTGPIIATTLVLAAVFIPTAFMAGLTGQFYKQFALTITISTFI
SALNSLTLSPALAALLLKGHDAPKDRLTRAMDKLFGTWLFNPFNRMFEKASRGYGFIVKK
VIRFGAIVGIIYLALVALTGVMFASTPTGYVPGQDKQYLVAFAQLPDAASLDRTEAVIKQ
MSEIALAQPGVAHSVAFPGLSINGFTNSPNSGIVFTPLDDFSERTDPSLSAEAIAMQLNQ
KFAGIEDAYIAIFPPPPVQGLGTIGGFRLQIQDKGNLGYDELYKVTMQVMQKAWGTPELT
GVFSSYQVNVPQLDLNIDRTKAKQQGVSLDEVFQTLQTYMGSTYVNDFNQFGRTYQVKMQ
ADEQFRQTPEQISQIKVRNQQGDMVPLGSFINVTQVAGPDRVMHYNAYTTAELNGGPAPG
YSSGEAQAAIEKILAETLPNGMTYEWTEITYQQILAGNAGLLVFPLVILLVFMVLAAQYE
SLSLPMAIILIIPMTLLSALSGVLLYGGDNNIFTQIGLIVLVGLATKNAILIVEFAKELQ
DEGMNVMDAILEATRLRLRPILMTSIAFIMGVVPMVFSTGAGAEMRQAMGVAVFAGMIGV
TIFGLLLTPLFYHFMAKRQKTNVDKNVEPDDSQGQLFAPVVNPAVNTLVTHKGANADA
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgttctcacaatttttcattaaacggcctatcttcgccgctgtgatctccttgatgttt
ttcatcgcgggcgctatcgcggtgtggaagttacctatcaccgaatacccagaagtagtg
ccgccaactgtggtggttaccgccagttacccaggcgctaaccctaaggtgattgcgcaa
actgtggcatccccccttgagcaggaaattaacggcgtagaagacatgttgtatatgtca
tcccaagccacctccgatggcctgatgacgctgaccattacctttgccattggcacagat
gtggaccgcgctcagactcaggtgcaagcccgtgtcgatagagccagccctcgcctgcct
caagaagtgcagcgcctaggcatagtgacagaaaaatcatcccctgatttaaccatggtg
gtgcatttaacctcgccggataaacgctatgacatgctgtacttgtcaaattatgcggcg
ctgaatgttaaagatgagctcgcccgtattgaaggtgtgggcgctgtgcgcttatttggc
gccggcgaatacagcctgcgtatttggctagaacccaacaaaatggcgggcttaaacttg
tcacccgcacaagtccttgcggcagtgcgtgagcaaaaccagcaagccgcagcaggtagc
cttggcgctcagcccagtggcggcgcggattttcaattgctgattaacgtgaaaggccgc
ttaagcacggttgaagaatttgaagacatcattatcaatgtaggcccacaaggcgaactt
agccgcctaagggatgtggccagagtcgagttaggcgccagcacttatgccctgcgctcg
ctactggataatcaagacgctatcgccattcctgtgttccaagcctcaggctcaaatgcg
attcagatttctgatgatgtgcgcgcaaaaatgagcgagctgtcagcctctttccccgac
ggcttaagctatgacatagtgtatgaccccacagtgtttgtgcgcggctctattgaagct
gtggttaaaaccttgtttgaagccatattgttggtggtattagtggtggtgctcttcttg
cagacatggcgcgcctcaataatccccttagtggccgtgcctgtgtccttggtgggtacc
tttgccttcatgcatttattgggcttctcgttaaatgcgctgtcactctttggtctagtg
ctggcgattggtatcgtggtcgatgacgccatagtcgtggttgaaaacgttgagcgtaat
attggcgatggtctctccccaatcgcggctactcaaaaagccatgagagaagtgactggt
cctattattgccaccaccttagtactggcggcagtatttatccccaccgcctttatggca
ggattaaccgggcaattctataaacagtttgcgctaaccatcaccatttcgacctttata
tcggcgttaaactcgctgacattaagcccagccctcgccgcattattgcttaaaggccat
gatgcgccaaaagatcgcttaacccgcgccatggataaactattcggcacttggttattc
aatccttttaaccgcatgtttgaaaaggcgtcacgaggctacggttttatcgttaaaaaa
gtcatccgctttggcgccatagtcggcatcatctacctagcgctagttgccttaactggg
gtgatgtttgctagcacaccaacagggtatgtgccggggcaagacaagcaatacctagtg
gcgtttgcacagctccccgatgcagcatcactggatcgcaccgaagcggtaatcaagcag
atgtcagaaattgccctagcacaacccggtgttgctcactcggtcgccttcccaggcctt
agcatcaatggtttcaccaatagcccgaacagcggcatcgtctttaccccactggatgac
tttagtgagcgcaccgatccaagtttgtcggcagaggctatcgccatgcagctaaaccaa
aagtttgctggaatagaagatgcctatatcgctatcttcccgccgccgccagtgcaaggc
ttaggcactattggtggctttagattgcaaattcaagacaagggcaacttaggttacgac
gagctatacaaagtcactatgcaggtaatgcaaaaagcttggggcaccccagagcttact
ggggtattttcaagctatcaggtgaatgtgccgcagcttgatctcaatatcgatcgcacc
aaggctaagcagcaaggcgtgtcactggatgaagtattccaaaccctgcaaacctacatg
ggctcgacttacgttaacgacttcaaccagtttggtcgtacttatcaagtaaaaatgcag
gccgatgagcagttccgtcaaacgccagagcaaattagccagataaaagtgcgtaaccag
caaggcgacatggtgccgctgggctcgtttattaatgtcacccaagtggcaggccctgac
agagtcatgcattacaacgcttacactacggcagagttaaacggcggcccagcacccggt
tatagttcgggtgaagcccaagctgcgattgagaaaattttggctgaaaccctgccaaac
ggcatgacctatgagtggactgaaatcacctaccagcaaattctggcaggcaacgccggc
ttgttagtcttcccgctagtgatcttgttagtgtttatggtgttagccgcccagtatgaa
agcctaagcttacctatggccatcatattgattatccctatgaccttattgtcagcctta
agcggcgtgctgctttacggcggagataacaacatcttcactcagattggcttaattgtc
ttggtggggctggcgaccaaaaatgccatcttaatcgttgaatttgcgaaagaactgcaa
gatgaaggcatgaatgtcatggacgcgattttagaggccacccgtctgcgtttacgcccg
atattaatgacctccatcgcctttatcatgggtgtagtgcctatggtgttctcaacgggt
gctggcgctgaaatgcgtcaagccatgggggttgcggtatttgcaggcatgataggcgtg
accatctttggcctactattaacgccgctcttctatcactttatggctaaacgtcaaaag
actaatgtcgacaaaaatgttgaacccgatgacagccaaggtcagttatttgcgcctgtc
gttaaccctgctgttaacacgttagtgactcacaaaggagccaatgcagatgcttaa
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