Shewanella denitrificans: Sden_3383
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Entry
Sden_3383 CDS
T00344
Name
(GenBank) 2-oxo-acid dehydrogenase E1 component, homodimeric type
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00010
Glycolysis / Gluconeogenesis
sdn00020
Citrate cycle (TCA cycle)
sdn00620
Pyruvate metabolism
sdn00785
Lipoic acid metabolism
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
sdn01120
Microbial metabolism in diverse environments
sdn01200
Carbon metabolism
sdn01210
2-Oxocarboxylic acid metabolism
Module
sdn_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Sden_3383
00020 Citrate cycle (TCA cycle)
Sden_3383
00620 Pyruvate metabolism
Sden_3383
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Sden_3383
Enzymes [BR:
sdn01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
Sden_3383
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Paralog
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Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
Motif
Other DBs
NCBI-ProteinID:
ABE56659
UniProt:
Q12IR7
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Position
complement(4035549..4038209)
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AA seq
886 aa
AA seq
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MSEHMLKDVDPQETSEWLSALESVVREEGVERAQYLLEQVLDKARLDGVDMPTGVTTNYV
NTIATKDEPAYPGDTTLERRIRSIIRWNAIMIVLRASKKDLDLGGHMASYQSSAAFYETC
FNHFFRAPNEKDGGDLVYYQGHISPGIYARAFVEGRLTADQLDNFRQEVDGKGIPSYPHP
KLMPEFWQFPTVSMGLGPMSAIYQARFLKYLDGRGLKDTSAQRVYAFLGDGEMDEPESRG
AISFAAREKLDNLCFLINCNLQRLDGPVMGNGKIIQELEGLFRGAGWNVIKVIWGNNWDA
LIAKDTSGKLLQLMNETVDGDYQTFKSKDGAYVRKHFFGKYPETAALVSDMTDAEIFALK
RGGHEPSKLYTAYKNAQETKGRPTVILAKTVKGYGMGEAAEGKNIAHQVKKMDMTHVLQL
RDRLGLQDLLTDEVVESLPYLTLEEGSKEHEYLHARRKALHGYTPQRLPNFTESLTLPAL
EEFTPLLEEQKREISSTMAFVRTLNILLKDKGIGQNIVPIIADEARTFGMEGLFRQIGIY
NPSGQTYTPEDRAVVSYYKEATSGQVLQEGINELGAMSSWVAAATSYSTNNLPMIPFYIY
YSMFGFQRVGDMAWLAGDQQARGFLLGATAGRTTLNGEGLQHEDGHSHVQASTIPNCISY
DPTFAYEVAVIIQDGIRRMYGNQENVFYYLTLMNENYAMPAMPAGSEAGIRKGIYKLESH
KGSKKVQLMSSGTIMNEVRKAAQILSEEYDVASDVFSVTSFNELARDGQDTERYNMLHPE
SDAKQAYITTVLGIEPAIAATDYMKNYAEQVRAYMPSVSYKVLGTDGFGRSDSRENLRRH
FEVNAGYVVVAALSELAKRGDIEKSVVTQAIAKFAIDTEKTNPLYA
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacatatgctaaaagatgttgatccacaagaaactagcgagtggttgtctgct
ttagaatctgttgtacgcgaagaaggtgtggaacgtgctcagtacttacttgaacaagta
ctagataaagctcgcttagatggcgttgatatgccgactggcgtgactaccaactatgtt
aacaccattgccaccaaagatgagccagcgtatccaggggataccacattagagcgccgt
atccgttctatcatacgttggaacgcaatcatgatagtgttgcgcgcatcgaaaaaagat
ttagatcttggcggccacatggcgtcttaccaatcttcagccgcgttttacgaaacctgt
tttaaccactttttccgcgcacctaatgaaaaagacggtggcgatttagtctattatcaa
ggccatatctccccaggtatttatgctcgtgcctttgttgaaggtcgtttaacggcggat
caattagataacttccgtcaggaagtggatggaaaaggcatcccttcgtatccacaccct
aaattaatgcctgagttttggcagttcccaacggtatctatgggcttaggtccaatgtcg
gccatttatcaagcgcgtttcttaaaataccttgacggtcgtggcctaaaagatacttct
gcgcagcgggtttacgccttcttaggtgatggcgagatggacgagccagaatctcgtggc
gctatttcgtttgctgcccgtgaaaaactcgataacttatgttttttaattaactgtaac
ttacagcgcctcgacggccctgtaatgggtaacggtaagattattcaagagcttgaaggt
ttattccgtggtgcaggttggaacgttatcaaggtgatttggggtaacaactgggatgcg
ctaattgccaaagacacctcaggtaagttattgcaattaatgaatgaaaccgttgacggt
gactatcaaacctttaaatcaaaagatggcgcttatgtccgtaagcacttctttggtaaa
tatccagaaactgcggcattagtgtctgatatgacagatgcagaaatcttcgccctgaag
cgtggtggtcatgagccatctaagctgtacacggcttataaaaacgcgcaagaaactaag
gggcgcccaacggttattttagctaaaaccgttaaaggttatggcatgggtgaggccgca
gaaggtaaaaacatcgctcaccaagtgaagaaaatggacatgacccatgtgcttcaatta
cgtgatcgtttaggcctacaagatctgttaaccgatgaagtggtcgagtctttaccttat
ttaactcttgaagagggttctaaagagcacgagtacttacatgctcgtcgtaaagcgcta
catggctacacgccgcagcgtttacctaatttcacagagagtttaaccctgcccgcactg
gaagaatttacgccactgcttgaagagcaaaagcgcgaaatttcatcaacaatggcgttt
gtgcgtaccttaaatattctgcttaaagataaaggcatcggccagaatatcgtgccaatt
attgccgatgaagcacgtacctttggtatggaaggcttattccgtcaaataggtatttat
aacccatcaggtcaaacttatactcctgaagatcgcgccgttgtgtcttactataaagaa
gccacctcaggtcaagtattgcaagaggggattaacgagttaggtgctatgtcatcttgg
gttgccgcggcaacttcgtacagcactaacaatttacccatgatccctttctatatttac
tactctatgtttggtttccaacgtgtaggtgatatggcatggcttgcaggtgaccaacaa
gcgcgtggtttcttacttggcgcaacagcgggtcgtactaccttaaatggtgaaggttta
cagcatgaagatggccacagccatgttcaagcaagcacgattcctaactgtatttcatac
gatccaacatttgcttatgaagtcgcggttatcatccaagacggtattcgtcgtatgtat
ggcaaccaagaaaacgtgttctattacttaaccttaatgaatgaaaactacgccatgcca
gccatgccagcaggtagcgaagcaggcattcgtaaggggatttataagcttgagtcgcac
aaaggcagcaagaaagtacagctaatgagctcaggcacaataatgaacgaagtacgtaaa
gcggcgcaaattctaagtgaagaatatgatgtggcatcagacgtattctcagtgacctca
tttaacgagcttgctcgtgatggtcaagacactgagcgttacaacatgctgcaccctgaa
tcggacgccaagcaagcttatatcaccacagtcttgggcattgagcctgcgattgctgcg
actgactatatgaagaactatgctgagcaagtacgtgcttacatgccgtctgtgtcttac
aaagtattgggtaccgatggttttggccgctcagatagccgtgaaaacttacgccgtcac
tttgaagtcaatgccggatatgtggtggtagcggcgctgagtgaactggctaaacgtggc
gatatcgaaaagtcagtcgtaacacaagcgattgctaagttcgctatcgacaccgaaaag
accaacccattatacgcataa
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