Shewanella denitrificans: Sden_3601
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Entry
Sden_3601 CDS
T00344
Name
(GenBank) secretion protein HlyD
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sdn
Shewanella denitrificans
Pathway
sdn01501
beta-Lactam resistance
sdn01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sden_3601
01503 Cationic antimicrobial peptide (CAMP) resistance
Sden_3601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sdn03036
]
Sden_3601
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdn02000
]
Sden_3601
01504 Antimicrobial resistance genes [BR:
sdn01504
]
Sden_3601
Chromosome and associated proteins [BR:
sdn03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Sden_3601
Transporters [BR:
sdn02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Sden_3601
Antimicrobial resistance genes [BR:
sdn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Sden_3601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
ABE56876
UniProt:
Q12I50
LinkDB
All DBs
Position
4315314..4316474
Genome browser
AA seq
386 aa
AA seq
DB search
MRNALKIAAVVTATIWMSACSQEGQTDAAAQGAPPPTPVSVLNVSTQSQAIQVELPGRSR
AFKEAEVRPQVSGIITERSFIEGTDVIKGQSLYQIDSATYRAALLSAEADLASAEAGLIS
AKAKADRFQSLVKTKAISQQDFDEAQAAFKEAKARVTVAKAAINTANISLQYTQVKAPIS
GRIGKSSITAGALVTANQADTLATISQLDPINVDIAQSSAQLLRLKAKFRQGELQKSDNA
DVTLVLEDGSNYQHTGTLRFAEVSVDEATGSVTLRAEFPNPDALLLPGMYVRALINTGLD
PNAILVPQKAITRNSKGEAVAMLVDVNNKVEMRPVTTAEVIDNQWRITSGLTAGDKLIVE
GLQKIRPGAEVMPQVWSAAPEANAGN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacgccttgaagatagccgctgtggtcacagcaacgatttggatgtcagcctgt
agtcaagagggtcaaactgacgctgcggctcaaggtgcgccgccgcccactcctgtcagt
gtgcttaatgtcagcactcagtctcaagcgattcaagtggaactgcctggccgtagccgc
gcctttaaagaagcagaagtacgccctcaagtctctggcattattaccgaacgtagcttt
atcgaaggcacggacgtaatcaaaggtcagtcgttatatcaaatagactcagccacgtat
cgcgccgcgttactaagtgcagaagctgacttagccagtgccgaggcaggcttaatctct
gcgaaagctaaggcggaccgctttcaatctttagtgaaaaccaaggccatcagccagcaa
gattttgatgaagcacaagccgcttttaaagaagcgaaagcccgtgtcacggttgccaaa
gccgccatcaacaccgccaatattagtctgcaatacactcaagtgaaggcgccgatttcg
ggtcgtattggtaaatcgagcatcacagctggggcgctagtgacagccaatcaagctgac
accttagccacgatttctcagcttgaccctatcaatgtggacatagcccaatctagcgcc
caattattgcgcctcaaagctaaatttaggcaaggtgagttacaaaaaagtgacaatgcc
gatgtcaccttagtattggaagatggcagcaactatcaacatacgggcacgcttcgcttt
gccgaagtgagtgtcgatgaggccacagggtctgtgactttgcgcgccgaattccctaac
ccggatgccttattactccccggcatgtatgtgcgggccctaattaatacaggcctagat
cctaacgcgattttggtgcctcaaaaagccattactcgtaacagtaaaggcgaagccgtg
gccatgctggtcgatgtcaacaacaaggtggagatgcgcccagtcaccacagctgaagtc
atagataatcagtggcggatcacctcaggtttaacggctggcgataagctgattgtcgaa
gggttgcaaaaaattcgcccaggtgcagaggttatgcctcaggtatggtctgcagcgcca
gaggctaatgcaggcaactag
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