Sphingomonas donggukensis: M9980_06945
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Entry
M9980_06945 CDS
T08944
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
sdon
Sphingomonas donggukensis
Pathway
sdon00300
Lysine biosynthesis
sdon00550
Peptidoglycan biosynthesis
sdon01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M9980_06945
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M9980_06945
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sdon01011
]
M9980_06945
Enzymes [BR:
sdon01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
M9980_06945
Peptidoglycan biosynthesis and degradation proteins [BR:
sdon01011
]
Precursor biosynthesis
Amino acid ligase
M9980_06945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
URW76923
LinkDB
All DBs
Position
complement(1413213..1414628)
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AA seq
471 aa
AA seq
DB search
MRLGALTGHGESETVTGFAIDHRKVAPGTIFGAFEGARVNGEDFIPAAIASGAIAVVARP
GAVVDGAVHIATDNPRACFAELAARYFAPFPATTVAVTGTNGKTSTVELTRQLWRMAGHH
AASIGTLGVTTADDRVTTGLTTPDVVTFLSNVAGLGREGVTHLAFEASSHGLSQYRTEGL
PVTAAAFTNLSRDHLDYHGDMANYLTAKLRLFAEVVRDDGVVVVWADDPNADPVIDLARA
RGLRLISVGTHGETLRLTGRTPTLLGQGLTIEAEGRTHQVNLPLIGAYQAANALTAAGLV
IATGGDVAQTLAGLSRLAPVRGRLERAVITRSGAPVYVDYAHTHDALDAAIAALKPHVTG
RLIVVFGAGGDRDAGKREPMGQAAASGADVVIVTDDNPRSEDPAAIRAAVLAGAPGAFEI
GDRRAAIAHAVAIAGPEDIVLLAGKGHEQGQIVGDLVLPFDDVAVVRDCAA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgggcgcgctcaccggtcacggcgagagcgagacggtcaccggcttcgcgatc
gaccaccgcaaggtggcgccgggcacgatcttcggcgcgttcgagggtgcgcgcgtcaac
ggcgaggatttcattcccgccgccatcgccagcggtgcgatcgccgtcgttgcgcgaccg
ggtgcggtggtcgacggagcggtgcatatcgccacggacaaccctcgcgcgtgcttcgcc
gaactcgccgcgcgctatttcgcgccgtttcccgcaacgacggtcgcggtcaccggcacc
aacggcaagacctccacggtcgaactcacgcgccagctgtggcggatggcggggcatcat
gccgcgtcgatcgggacgctgggggtaacgaccgccgacgaccgcgtgacgaccggcctc
accacgcccgatgtcgtcaccttcctgtcgaacgtcgccgggctggggcgcgagggcgtc
acccacctcgcgttcgaggcgtcgagccacggcctgtcgcaataccggaccgaggggctg
ccggtcaccgccgccgccttcaccaacctcagccgcgatcacctcgattatcacggcgac
atggcgaattacctgaccgccaagctccgcctgttcgccgaagtcgtgcgcgacgacggc
gtggtggtggtgtgggcggacgatcccaatgccgatccggtcatcgacctggcgcgtgcg
cgcgggctgcggctgatctcggtcggcacgcatggcgagacactgcgcctgaccgggcgc
acgcccactttgctggggcaggggctgacgatcgaggcggaggggcggacgcatcaggtc
aacctgccgctgattggcgcctatcaggcggcgaacgcgctgactgcggccggcctcgtc
atcgcgaccggtggcgatgtggcgcagacattggcggggctctcgcgattggcaccggtg
cgcggacggctggagcgcgcggtcatcacgcgcagcggcgcgccggtctatgtggattac
gcgcatacccacgatgccctcgacgccgcgatcgccgcgctcaagccgcatgtgacgggg
cggctgatcgtcgtgttcggcgcgggcggggaccgcgacgcagggaaacgcgaaccgatg
ggccaggccgctgcttccggggccgacgtcgtgatcgtcaccgacgacaacccccgctcc
gaagatcccgctgcgatccgcgccgcggtgcttgccggggcgcccggagcgttcgagata
ggcgaccgccgcgccgccatcgcccacgccgtcgccatcgccgggcccgaggatatcgtg
ctgctggcgggcaaggggcacgagcagggccagatcgtcggtgacctggtgctgccgttt
gacgacgtcgccgtggtgcgcgattgcgcggcatga
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