KEGG   Seriola dumerili (greater amberjack): 111217261
Entry
111217261         CDS       T05606                                 
Symbol
ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog
  KO
K19656  intraflagellar transport protein 122
Organism
sdu  Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:sdu03037]
    111217261 (ift122)
Cilium and associated proteins [BR:sdu03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   111217261 (ift122)
SSDB
Motif
Pfam: TPR_IFT122 Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Beta-prop_THOC3 Zn_ribbon_IFT122_C Beta-prop_EML_2 WD40 Zn_ribbon_IFT122 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz EIF3I Beta-prop_WDR3_2nd ANAPC4_WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_NUP159_NUP214 NBCH_WD40 TPR_GEMI5 TPR_IF140-IFT172 WD40_Gbeta TPR_IFT80_172 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_RSE1_2nd eIF2A TPR_WDR35 Beta-prop_Vps41 TPR_COPA_B TPR_7 TPR_2 Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_IFT140_2nd Beta-prop_WDR41
Other DBs
NCBI-GeneID: 111217261
NCBI-ProteinID: XP_022594757
LinkDB
Position
Unknown
AA seq 1183 aa
MRAVLAWKETSECVYDLAFKPDGSQLIIAAGHRVLVWDAADGSIIQPLKGHKDIVYCVAY
AKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVAYNPVTHQLASCSSGDFGLWSP
EQKSVNKHKVSSKITCCGWTNDGQYLALGMMNGVVSIRNKNGEEKVKIERPGGSSSPIWS
IAWNPSKDEHNDILAVADWGQKLSFYQLSGKQIGKDRTLTYDPCCVSYFSKGEYIVMGGS
DKQASLYTKDGVRLGTIGEQNAWVWTCRVRPDSNFVVLGCQDGTIACYQLIFSTVHGLYK
DRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYRNRLAIQLPEKILIYELYSDDSS
DMHYRIKEKICRKFECNLLVVCSQHIILCQEKRLQCLSFTSVREKEWVMESLIRYIKVIG
GPPGREGLLVGLKNGAILKIFVDNPFPITLLKLSTSVRCLDMSASRNKLAVVDEHNTLLV
YDINSKELLFQEPNANSVAWNTQCEDMLCFSGNGYLNIKASNFPVHQQKMQGFMVGYNGS
KIFCLHVYSMSAVEVPQSAPMYQYLERKMFKEAYQIACLGVTDSDWRDLATEALEGLDFE
TAKKAFIRIRDLRYLELINSIEERKKRGENDNELFLADVYAYQGKFHEAAKLYKRTGHES
RALSMYTDLRMFEYAKEFVGATDPNSSRILMTKQADWAKSSKEPRAAAEMYLSAGEHLKA
IDIIGEHGWADMLIDIARKLDKAEREPLGKCALYFKRLKHHGYASETYSKMGDLQALVQL
HVETRHWEEAFSLVEKHPQFKNNVFVPYAQWLAENDRFEEAQKAFHKAGRQNEAVKVLEQ
LTHNAVVENRFNDAGYYYWMLSMQCLDIARESEEQRDEMLKKFERFQHLAELYHVYRSIQ
RYTDEPFSSHMPETLFNICRFLLNNLTKDIPPGISKVNTLYALAKQSQKLGAYKLARYSY
EKLQELHIPSRFQESIERGSLTIRSKPFHDSEDLIEGMMCYRCSTNNPLLNNQGSMCINC
RQPFIYSASSYEVLPLVQFYLEEGISDEEAVSLIDLEVPHMDERNAHLHHTDNGELQALR
MDDGLDNAEEDPFTAKMSFEQGGSNFVPVKVSHSVLRSMSRRDVLIKRWPRPLKWEYFRS
LLPDVSITMCPTCFKMFHSEDYELLVLQHNCCPYCRRPIDEPN
NT seq 3552 nt   +upstreamnt  +downstreamnt
atgagagccgttctagcatggaaagaaacaagtgaatgtgtttatgaccttgccttcaag
ccagatggtagccaactcatcattgctgcagggcatcgtgtccttgtttgggacgcagca
gatggatctattatccagcctttaaaaggacacaaagacatagtgtactgtgtggcctat
gccaaagatggtaaaaggtttgcctctgggtcagcagacaaaagtatcatcatctggaca
tctaaactggagggtattttaaaatatactcacaatgactctatccagtgtgttgcctac
aaccctgtcactcaccaacttgcctcctgctcttctggggactttgggctttggtcacct
gagcaaaaatctgtgaacaaacataaagttagcagcaaaataacatgttgtgggtggaca
aacgatggccaataccttgcacttggcatgatgaatggagtagtgagcatacgaaacaag
aacggagaggagaaagtcaagatagagcgtccaggaggctcctcctctcctatctggtcc
attgcctggaacccttctaaggatgagcacaatgatattctggctgtggcagactggggt
cagaagctctccttctatcagctcagtggaaagcagattggaaaagacaggactctcacc
tatgacccatgttgcgtcagttacttctctaagggcgagtatatagttatgggcgggtct
gataaacaggcctccctctacacaaaagatggtgtgcggctaggcaccattggagagcag
aatgcctgggtctggacgtgccgggttaggcctgactccaacttcgtggtgttgggctgc
caggatgggaccatcgcctgctaccaacttatcttcagtacagttcacggcctttacaag
gatcgctatgcttatagagacagcatgactgatgtcattgttcagcacctcatcactgaa
caaaaagtgaggatcaagtgccgtgagcttgtgaagaagatcgccatctacagaaaccgt
cttgccatccagctgcctgagaagatcctcatctatgagctctattcagatgactcctca
gacatgcactaccgcatcaaggagaaaatttgcaggaagtttgaatgcaacttgctggta
gtctgctcccagcatatcatcctgtgtcaggagaagaggctccagtgcctgtccttcacc
agtgtcagggaaaaagaatgggtgatggagtccctaattcgctacatcaaagtgattggt
ggtccgccaggcagagagggcctactagtgggattaaagaatggggctatcctgaagata
tttgttgacaacccgtttcccatcacgctgctgaagctgtcaacgtcagtgcgctgcctg
gacatgagcgcctcccgcaataaactggctgtggtggatgagcacaacactctcctggtc
tatgacatcaacagcaaagaactgctttttcaggagcctaatgctaacagtgtggcctgg
aacacccagtgtgaggacatgctgtgcttctctggcaacgggtaccttaacatcaaggct
agcaacttccctgtacaccagcagaagatgcaaggctttatggtcggctacaatggctct
aagattttctgtctccacgtctattccatgtcggctgtggaggtgcctcagtcagcaccc
atgtaccagtacctggagaggaagatgtttaaggaggcctaccagatcgcctgtctgggt
gtgacagacagtgactggagggatttagccacagaagccctggagggacttgactttgaa
accgctaagaaggccttcattagaatcagagacctgcgctacctggagctcatcaatagc
attgaggagaggaagaagcggggtgagaacgacaatgagctgttcctggcagacgtctat
gcctaccaggggaaattccatgaggcagccaagctctacaaacgcaccggccatgaatca
agagcccttagcatgtatactgacctgcgcatgtttgagtatgccaaggagtttgttgga
gccacagacccgaacagctctcggatcctgatgaccaagcaggcagactgggctaagagc
agcaaggagccgcgggcagcagcagagatgtacctgtcagctggagaacatctcaaagcc
atagacattataggcgagcatggctgggcagacatgctgatcgacatcgctcgtaagttg
gacaaggctgagcgcgagccgctgggtaaatgtgcgctctacttcaagaggctgaagcac
catggctatgcctcagagacttattccaagatgggagacttgcaggctctggtgcagctg
catgtggaaacccggcactgggaagaggccttctcgctggtggagaagcacccccagttc
aaaaacaacgtctttgtgccttatgcccagtggttggctgagaatgatcgctttgaggag
gcacagaaggcatttcacaaggcagggcgacagaacgaagctgtgaaagtactggagcag
cttacccacaatgcagtggtggagaacaggttcaatgatgcagggtactattactggatg
ctgtctatgcagtgtctggacattgctagagaaagcgaagaacagagggatgaaatgctg
aagaagtttgagcgttttcagcatcttgctgagctctaccatgtctatcgctccattcag
cgctacacggatgagcccttcagctcccacatgccagagacactcttcaacatctgcagg
ttcctcctgaacaacctcaccaaggacataccaccaggcatttccaaagttaacaccttg
tatgcattggccaagcagagtcaaaaactgggtgcatataagcttgccaggtattcttac
gagaagctccaggagctgcacattccctctcgcttccaggagtccatagagcggggcagc
ctcaccattcgctccaaacctttccacgacagtgaggatctgattgagggcatgatgtgc
taccgctgctccaccaacaaccccctgctgaacaaccaggggagtatgtgcatcaactgc
aggcagcctttcatctactcagcttcatcatatgaggtgctgcccctggtgcagttctac
ctggaggagggcatcagcgatgaggaggctgtttctcttattgacctggaagttcctcac
atggatgagaggaatgcacacttgcaccatacggacaatggtgaactgcaggctttgagg
atggatgatggcttggataatgcagaggaagacccatttacagccaaaatgagctttgag
caggggggctcgaactttgtccccgtcaaggtgagtcactctgtgctgcgctccatgagc
aggagggatgtcctgatcaaacgctggcccaggccgctcaaatgggaatacttccgctcc
ctgctgcctgatgtgagcatcaccatgtgccccacctgcttcaagatgtttcacagtgag
gattatgagctcctggtgctccagcacaactgctgtccatactgtcgcagacccatcgat
gaaccaaactga

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