Seriola dumerili (greater amberjack): 111217845
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Entry
111217845 CDS
T05606
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04010
MAPK signaling pathway
sdu04137
Mitophagy - animal
sdu04141
Protein processing in endoplasmic reticulum
sdu04210
Apoptosis
sdu04217
Necroptosis
sdu04621
NOD-like receptor signaling pathway
sdu04622
RIG-I-like receptor signaling pathway
sdu04920
Adipocytokine signaling pathway
sdu05132
Salmonella infection
sdu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111217845
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111217845
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111217845
09143 Cell growth and death
04210 Apoptosis
111217845
04217 Necroptosis
111217845
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
111217845
04622 RIG-I-like receptor signaling pathway
111217845
09152 Endocrine system
04920 Adipocytokine signaling pathway
111217845
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111217845
09171 Infectious disease: bacterial
05132 Salmonella infection
111217845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdu03019
]
111217845
04121 Ubiquitin system [BR:
sdu04121
]
111217845
Enzymes [BR:
sdu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111217845
Messenger RNA biogenesis [BR:
sdu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
111217845
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
111217845
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
ATG16
At3g49055
zf-RING_6
zf-C3HC4_4
Dynamitin
Motif
Other DBs
NCBI-GeneID:
111217845
NCBI-ProteinID:
XP_022595561
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MATQEPSPPSSMESNKPGFPKKILGNKLEDKHLCNCCHNILRRPFQAQCGHRFCSYCFNR
TVSSGPQKCNACIKEDIFEDPTSILKQGCAFPDNAVRREVENLSAVCVNESCTWKGSIKE
YELNHEGKCEFMIIPCPSCKERIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDMSVEKEKIHDHERAYA
YEHLNLLLHYIMGMKVSMEGLQPQGLELAGHKLVELQQSLRELEARVSQLSTTSSGPPVQ
GAAAAASSSSSSSGPPGPPTSAPLPPPPTLAPTLSVSTSFTPLPSSVGAALELQLHSEKT
KVAELGRRCTELEVKAGTFENVVCVLNREVERFATTMEASNRQHKLDQDKIEALSNKVRQ
LERTVGLKDLTVAEMEGRLREMSATTFDGVFVWRISDFAKKRQDAIAGRAPAMFSPAFYT
SKYGYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSNREHI
IDAFRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDTIFIKAIVDLTGL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggccacacaggaaccgtcccctccttcgtccatggagagcaataaacccggcttcccc
aagaagatcctgggcaacaagctggaggacaagcacctgtgcaactgctgccacaacata
ctgagacgaccatttcaagcccagtgtggacatcgcttctgttcctactgcttcaacagg
acagtgagtagtggaccccagaaatgcaacgcctgcattaaagaggatatttttgaggat
cccacgtcgattctgaaacaaggatgtgcttttcctgacaacgcagttcggagggaagtt
gaaaacctgtcagctgtttgcgtcaatgaaagttgcacttggaaaggcagcatcaaagag
tacgagctgaaccacgaggggaagtgcgagttcatgatcatcccctgcccctcctgcaaa
gaacgaattcgcttcaacgaacaggagcgccacaacgagcgcgagtgcccggagagaacg
ctcaactgcaagtactgcaaggagccatttcacttcaaaaacatcaaggcgcatgatgag
atctgccccaagtacccgatgatctgtgaaggctgcgccaagaagaaaatacccagagag
aagtatgtggaccacattaagttctgcagcaaattcagaactccgtgtcgatttcatgtc
gtgggatgtgacatgtctgtggagaaggaaaagattcatgaccatgagcgcgcctacgcc
tacgagcacctgaacctgctgctgcactacatcatgggcatgaaagtgagcatggagggc
ctgcagccccagggactggaactggccggacacaaactggtggaactgcaacagtccctc
agggagctcgaggccagagtctcccagctcagcaccacctcctctgggcctcccgtgcag
ggagccgccgccgccgcctcctcctcatcctccagctccggcccccccggtcctcctaca
tcagcccctctccctccgcctcccaccctggctcccactctctccgtgtctacctccttc
acgcctttgcccagctcggtgggagcggcgctggagctccagctccacagcgagaagacc
aaggtggccgagctgggccgcaggtgcaccgaactggaagtcaaagccggcacgttcgaa
aatgtggtgtgtgtcctgaacagagaggtggagaggttcgccaccaccatggaggccagc
aaccgtcagcataaactggaccaggacaagatcgaggcgctgagtaacaaggtgcgacag
ctggagaggacggtggggctgaaggacctgacggtggctgagatggagggccggctgagg
gaaatgtccgccactacctttgacggtgtctttgtctggaggatctctgatttcgccaag
aagagacaggacgccatcgcaggtcgagcccccgccatgttctcaccagccttctacacc
agtaagtacggctataagatgtgtctgcggatctatctgaacggagatgggacggggcgc
ggcagccacttgtccttgttctttgtggtgatgaggggactgagcgacgccctgctcaaa
tggcccttcaaccagaaggtgactctgatgctgctggaccagagcaacagggagcacatc
atcgacgcctttcgacccgacgtcacttcctcctccttccagaggcccgtgagcgagatg
aacatcgccagcggctgtccgctcttctgcccgctctccaagctcgacgccaagaactct
tacatccgcgacgacaccatcttcatcaaggcgatcgtggacctcaccggcctctag
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integrated database retrieval system
