Seriola dumerili (greater amberjack): 111218206
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Entry
111218206 CDS
T05606
Symbol
rapgef4
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04081
Hormone signaling
sdu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
111218206 (rapgef4)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
111218206 (rapgef4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111218206 (rapgef4)
Membrane trafficking [BR:
sdu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
111218206 (rapgef4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
DEP
cNMP_binding
RasGEF_N
VTC
RA_2
RA
FKBP15
DUF4587
Motif
Other DBs
NCBI-GeneID:
111218206
NCBI-ProteinID:
XP_022596106
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MAGLLAPPYGVMESGCSADKMPDKENISNNSIVSVSKHQNKKSFIESPAKPHPKCISQVP
SEKILRAGKILRNAILSRAPHMIRDRKYHLKTYRQCCVGTELVDWQMQQSSCVHTRIQAV
GMWQVLLEEGVLNHVDQELSFQDKYLFYRFLDDEQEDAPLPSEEERQESQEELQDTLLLL
SQIGPDAHMRMILRKHPSERTADDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHAK
AGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLR
EDNCHFLRVDKEDFNRILRDVEANTVRLKEHGQDVLVLEKSLSSSRTSVQGASSSHYKYK
VMSGTPEKILEHLLEMMRLDSQFTESDSALDDFVLMHCVFIPNSQLCPVLMAHYHAEALQ
GSEQEKLDYTLNNKRRVIRLVMQWAAVHADHQQEEDNLVAFLEEFLMAVSNDAKAIAALR
DQVTELDRIVKRNAEDARLSQKKHKILLRQFSTGDEKLQKRQPIKSNDEILLKVYCCDHT
YTTIRAPVATSVREVIGAVADKLGSAEDLLLVNLSSAGEKVIFKPNDVSVFSTLSINGRL
FACRRDQLDSLTPLPEQEGPSTGSLASFELMSSKDVAYHMTSYDWELFHCVHELELIYHT
FGRQNVKKTTVNLDLFLRRFNEIQFWVISEMCMCSQLSKRVQLLKKFIKIAAHCKEYRNL
NAFFAVIMGLSNPAVSRLSQTWEKLPSKFKKFYSEFENLMDPSRNHRAYRLTVAKLEPPI
IPFMPLLIKDMTFTHDGNKTFIDNLVNFEKMRMIANTVKIVRYCRSQPFSPDSPLASKNH
PEVQTYVRQLKVIDNQRTLTQLSHGLEPRRS
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggctggactccttgccccaccctatggtgtgatggaaagtggctgtagtgctgacaaa
atgccggacaaggagaacataagcaacaactcaattgtttcagtctccaaacatcagaat
aagaagtcattcattgaaagcccagccaaaccccaccccaaatgcatttcacaggtgccc
tcggagaagatcttacgggctgggaagattctccgtaacgccatcctctccagggcgcct
cacatgatcagagacaggaagtaccatctgaaaacatataggcagtgttgtgtggggaca
gagttggttgactggcaaatgcaacagagctcatgcgtccacactcgtattcaggctgtg
ggcatgtggcaggtgctgctggaagaaggtgttctcaaccatgtggaccaggagctgagc
ttccaggacaagtacctcttctaccgcttcctggatgatgaacaggaggatgcccctttg
cccagtgaggaggagaggcaggagagccaagaggagctgcaggacaccctgctcctcctc
tcgcagattggacctgatgcccacatgaggatgatcctgaggaaacatccatctgaaaga
acagcagatgatttagagatcatttatgaagagctgctccatataaaggccttatctcat
ctatccaccactgtaaagagagaactggcaggggtgctgatctttgagtctcatgcaaaa
gcagggacagtgttgttcaatcaaggggaggagggcacatcgtggtacattattctgaag
ggctcagtcaacgtcgtcatctatggaaaaggtgttgtttgcacgcttcatgaaggagat
gactttgggaagctggcacttgttaatgacgccccccgtgctgcttccattgtcctgcga
gaggacaactgtcacttcctgagagtagacaaggaggacttcaaccggattttgagggac
gtggaggccaacacggtgcgtctgaaggagcacggtcaggatgttctggtgttggagaag
agtctcagcagcagtcggacctccgtccagggagcctcatcctcacattacaaatacaag
gtaatgtcggggacgccggagaagattttggagcacctccttgaaatgatgcgattggat
tctcaattcacagagtcagactccgccttagatgactttgtgctcatgcactgtgtcttc
atcccaaatagtcaactgtgtccagtgttgatggcccactaccatgccgaggccttgcag
ggttctgaacaggagaagctggattacacgcttaacaacaagcgcagggtgatccgtctg
gtgatgcagtgggcagctgtacacgcagatcaccagcaggaggaggacaatttggtggcc
ttcctagaggagtttctcatggcggtatctaatgatgccaaagcgattgcagccctcagg
gatcaggtaacggagctggatagaattgtaaagcgcaacgctgaagatgccagactctca
cagaaaaagcacaaaattctgctgcggcagttcagtacgggagatgagaagcttcagaaa
cgtcagcccataaagagtaatgatgaaattcttttgaaagtctactgctgtgaccatacc
tacaccacaatccgggcccctgtggccacctcagtcagggaggtcatcggtgctgtggct
gacaaactggggtcagcagaggacctgctcctggtcaacctcagttcggcaggagagaaa
gtgatcttcaagcccaacgatgtttcagtgttctccactctcagcataaatggacggctg
tttgcctgccgaagggaccagctggattctttgacccctttacctgagcaggagggtccc
tctacagggtcactggccagctttgagttgatgagctctaaggatgtggcttaccatatg
acctcctatgactgggaacttttccactgtgtacatgagcttgaactcatctaccacaca
tttgggaggcaaaacgttaagaaaaccaccgtgaacctggatctgttcctgaggaggttt
aatgaaattcagttttgggtgatctcagagatgtgtatgtgttctcagctcagcaagcgg
gtgcaacttctcaagaagttcatcaagattgctgcccactgtaaggagtacaggaatcta
aacgccttctttgctgtcattatgggcctgagtaacccagcagtgagcaggctgagtcag
acctgggagaaacttcccagcaaattcaagaagttttacagtgaatttgaaaatttgatg
gacccatccaggaaccacagagcgtaccgactgacagttgccaagctggagcctcccatc
attcccttcatgccgctgctgatcaaagacatgacattcactcatgacggcaacaagaca
tttattgacaatttggtcaattttgaaaaaatgcgaatgatagctaacacagtgaagata
gtgagatactgtaggagccagccattcagtccagattcacctctggccagcaagaaccat
ccagaagttcagacttatgttcgccagctcaaagtgatcgacaaccaaaggacgctaact
cagctctctcatggacttgagcctcgcaggtcttga
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