Seriola dumerili (greater amberjack): 111218540
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Entry
111218540 CDS
T05606
Symbol
nr1i2
Name
(RefSeq) nuclear receptor subfamily 1 group I member 2
KO
K08540
pregnane X receptor
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111218540 (nr1i2)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sdu03310
]
111218540 (nr1i2)
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111218540 (nr1i2)
Nuclear receptors [BR:
sdu03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
111218540 (nr1i2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF5702
Motif
Other DBs
NCBI-GeneID:
111218540
NCBI-ProteinID:
XP_022596612
UniProt:
A0A3B4TJA8
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Position
Unknown
AA seq
439 aa
AA seq
DB search
MSKKPTGAETICEALMRQNEEDEEETVSEDEEPRACGVCGDQAKGYHFNALTCEGCKGFF
RRAIKRSTQLRCPFLNKCSITKNNRRSCQACRLRKCQAIGMRKEMVMSEKEVLERRIRIK
KKKMLDAPIQLSSQQKETIQELLCGHRRTFDSAFSSFSGFRPMDRIILSVSEYNQPTREP
FNPLTNCPTNICTKTSKSATGPRTSSCANFLSSSSFCGSFEKQKNREGEEVTKNIIFTAL
PHVTDLTTYMIQDIISFSKSLQDFRSLTMGDQIALLKGATFEIMQIRFNMVFNAKASIWE
CGHITYCIDDAVRAGFQPLLLEPLFKFHHTLRTLGLQEEEYVLMQAMSLFSPDRPGVQQH
SVIDELQENLALTLKTWIDCKRTGPEKHLLYPKVVACLTEMRTMTEEYSKQVLQIQDIQP
DDISPLILEVVSRNPCDDF
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaagcccactggagcagagaccatctgtgaggcactcatgaggcaaaatgaa
gaggatgaagaggaaacagtgtctgaagatgaggagcccagagcttgcggtgtgtgtgga
gatcaggccaaaggttaccacttcaatgccttgacatgtgaaggctgcaaaggcttcttc
agacgtgccataaagaggtcaacgcagctccgctgtccattcctgaataaatgcagtata
accaaaaacaaccgccggtcatgtcaagcctgtcgcctccgcaaatgccaggccataggc
atgcgcaaagaaatggtcatgtctgagaaggaggtattggagaggaggatccgaatcaag
aaaaaaaagatgcttgacgccccaatacagctctcatcacagcagaaggaaaccattcag
gagctactctgtggccaccgccgcacatttgactcagcattttccagcttcagtggcttt
aggcctatggacagaatcatcctttctgtgagtgagtacaaccagcctacaagggagccc
tttaaccccctgacaaactgccctacaaacatctgcactaaaaccagtaaatctgccaca
ggccccagaacatcctcatgtgccaacttcctctcctcctccagtttttgtggttccttt
gaaaaacaaaagaaccgagaaggagaagaggttacaaaaaacattatttttactgctctt
ccacacgtgactgacctcaccacttatatgatccaggacatcatcagtttctccaaaagt
ctacaggacttcaggtctctaaccatgggggatcaaattgccctgttgaagggggccaca
tttgaaattatgcagatccgcttcaacatggtgttcaatgctaaagcaagcatctgggaa
tgtggccatattacatactgcatagatgacgctgtacgagcgggtttccagccgctcctc
ctggagcctctgttcaaattccaccacacactacgcacactgggcctgcaagaggaagag
tatgttcttatgcaagccatgtccctgttttctccagatcgtccaggtgtgcagcaacac
agtgtgattgatgagcttcaggaaaacttggcactgacactaaaaacctggattgactgc
aagagaacaggcccagagaaacatttgctgtaccccaaagtggtggcctgtcttacagaa
atgagaacaatgactgaggagtacagtaaacaggttctgcagatccaggacatccagccg
gacgacatctctccccttatattggaggtggtcagtagaaacccctgtgatgacttctaa
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