Seriola dumerili (greater amberjack): 111218929
Help
Entry
111218929 CDS
T05606
Symbol
pkp1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sdu04812
]
111218929 (pkp1)
Cytoskeleton proteins [BR:
sdu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
111218929 (pkp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
HEAT_EZ
HEAT
V-ATPase_H_N
HEAT_2
Atx10homo_assoc
ELMO_ARM
Arm_2
Nipped-B_C
Motif
Other DBs
NCBI-GeneID:
111218929
NCBI-ProteinID:
XP_022597135
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MMAPEPLRSAMTIRCSEDTSLALPSDNKLRSGQQRVLDQVHTIKRGKSKHGKNDPLSPSP
TSPIPQNLTSCVDFGSFKFSPSKANGTFSRTSSTMSSGFNKTINTQRSRTLSTKTVGPFS
ASGTWEQQIQGSNWPKSPNGLKPSRSDPTLAPPFSPAPAPVMRAKGQSFHSQHAIQTRVN
RHSTYSLTNGTQMTNSQTRIVRPPSAQSHTEGKMGTIKITKKALQQTAVNSGINVSDVTL
KEAVEYLSHPEEKFQQFGATFIQHTTFNEERAKQEVFQLEGIPALVTLLRSPNPAVSQAS
AGALRNLVFKDKNNKLEVQHCGGIAKALQLLKETDSTDTQKQITGLLWNLSSSDELKEEL
TVTALPALTENVVVPFTGWSDNSTNNNIHPDVFYSATGCLRNLSCAKKRERQAMRDCPGL
IDSLMSYVQSCVAEENPDDKSVENCACILHNLTYQLESEAPGCFSNYYPRTDDESGGRKS
PTVGCFSPKSSKAQKQYMFDMDRAVLEDSTPSGQKWLCHPKAMQTYLSLLGSSKKDSTLE
ACCGALQNLTANKGLGSSAMSQILVQKFGALLHMTPLLKSQNSGLQKTAMSLLNNMSRTS
SVQTSMAKQILPELTGLLSSGPREMGKSDDTIAAACSTVRTLMMADTEVSKKVINNELVT
SLADLSENGSFPKGSKAAALLLYSLWNEKNLQGTAKKLGLAKSLFVNDNTTAQYKQMID
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgatggctccggagccgctgcgatcagctatgaccatcaggtgctcggaggacacgtcg
ctcgcgctgccctccgacaacaagctgcgctctggacagcagcgcgtgctggatcaggtg
cacaccatcaagaggggcaagtccaagcacgggaagaacgacccgctgtccccctctcct
acaagcccgataccgcagaatttgacatcatgcgtcgattttggatcgttcaagttttct
ccgtccaaagcaaatggcaccttcagccgcaccagctccactatgtcatcgggcttcaac
aaaacgataaacactcagaggagtcgcactctgtccactaaaaccgtgggacctttcagc
gcgtcgggcacatgggagcagcaaatccaaggctccaactggccgaagagtcccaatggg
ctgaaacccagtcgcagtgaccccaccttggctcctccattttctcctgcccctgcacct
gtcatgagagccaaggggcagtcattccatagccagcacgccatccagactcgagtcaat
agacacagcacctactccttgaccaacggcactcagatgaccaacagccagacacgcatc
gtccggccgccctctgcccagtcccacactgagggcaagatgggaaccatcaaaataact
aagaaagcgcttcagcagacagcggtgaacagtgggataaacgtgtcagacgtgacccta
aaggaggctgtagagtacctgtctcaccccgaggagaaattccagcagtttggggccacc
ttcatccaacacaccaccttcaatgaggagcgtgccaaacaggaggtcttccaactggag
ggtatccccgctctggtgaccctgctgcggagccccaacccagcggtgagccaggcttct
gccggggctctgaggaacctggtgtttaaggacaagaacaacaagctggaggttcaacac
tgcggtggtatagctaaggccctgcagctcctaaaggagaccgactctactgatactcag
aaacaaatcacaggcctgctgtggaacctgtcctccagcgatgagctgaaggaagaactc
acagtgacggcgctgcccgctctgactgagaatgtggtggtgccgttcaccggctggtca
gacaacagcaccaacaacaacatacaccctgacgtcttctacagtgccacagggtgcctg
cggaacctgagctgtgccaagaagagggagaggcaagcaatgagagactgccctggcctc
atcgactccctcatgagttacgttcagtcgtgtgtggcagaggaaaacccagatgacaag
tctgtggagaactgcgcatgcatcctccataacttgacctaccaactggagtcggaggcc
cctgggtgcttcagcaactactaccctcggacagacgacgagtctgggggtaggaaaagc
cccacagttggatgcttcagccccaagagcagcaaggctcaaaagcagtatatgtttgac
atggatcgggcagtgcttgaggacagtaccccatcaggtcaaaagtggttgtgccatccc
aaagccatgcagacctacctgtctctgctgggctcgtccaagaaagactccaccctggag
gcttgctgtggtgccctgcagaacctcactgccaacaaaggactggggtcctcagccatg
agccagatcctggttcagaaatttggtgctctgctgcacatgacccctctgttaaagtca
cagaactctggcctgcagaagaccgccatgtccctgctgaataacatgtctcggaccagc
agtgtgcagacctccatggcaaagcagattctgcctgagctcacaggcctcctctcctct
ggcccccgggaaatgggaaaaagtgatgacactatagcggcagcttgtagcacagtacgg
actctgatgatggcggacaccgaggtcagcaagaaggtcattaataatgaactggtgaca
tcgctggctgacctcagtgagaatggatctttccctaaaggcagcaaagcagccgcattg
ctgctctacagcttatggaatgagaagaatttgcaaggcactgcgaaaaagctgggattg
gccaagtcgctttttgtcaatgacaacaccacagcacagtacaagcaaatgatcgattga
DBGET
integrated database retrieval system
