Seriola dumerili (greater amberjack): 111219126
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Entry
111219126 CDS
T05606
Name
(RefSeq) beta-1,4-galactosyltransferase 3-like
KO
K07968
beta-1,4-galactosyltransferase 3 [EC:
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu00510
N-Glycan biosynthesis
sdu00513
Various types of N-glycan biosynthesis
sdu00514
Other types of O-glycan biosynthesis
sdu00515
Mannose type O-glycan biosynthesis
sdu00533
Glycosaminoglycan biosynthesis - keratan sulfate
sdu00601
Glycosphingolipid biosynthesis - lacto and neolacto series
sdu01100
Metabolic pathways
Module
sdu_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
sdu_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
111219126
00513 Various types of N-glycan biosynthesis
111219126
00515 Mannose type O-glycan biosynthesis
111219126
00514 Other types of O-glycan biosynthesis
111219126
00533 Glycosaminoglycan biosynthesis - keratan sulfate
111219126
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
111219126
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sdu01003
]
111219126
Enzymes [BR:
sdu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
111219126
2.4.1.90 N-acetyllactosamine synthase
111219126
Glycosyltransferases [BR:
sdu01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
111219126
Glycolipid
111219126
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
111219126
NCBI-ProteinID:
XP_022597440
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MACFGRSLDSPCTLALLVGFQFAFVLYFSLGGFKGLVSVLVHTTEPEFDYSRPHDVYTNL
SHLGVPPPPPRNSGTGSPATGPPLRDCQIPSPLLVGPVSVHLSSPLSLEDIRQRNPLVMP
GGRYRPPDCEPRHHTAIVVPYRNRQTHLRALLYHLHPFLQRQQIHYSIYIVQQWGNGTFN
RAKLLNVGVREALRDEDWSCIFLHDVDLLPENDHNTYTCHKQFPTHLSVAMDKFRYRLPY
PQYFGGVSAVTPDQYMKMNGFPNQYWGWGGEDDDIAARVRLSGMKIVRPPVAIGHYKMIK
HKGDRGNEQNPRRFDLLKRTRLNWRSDGLNSLTYELLSKQLEPLYTNLTVNIGEDPRLPP
GKAPIPLKTTTPVHQRSTSKTEGTGKQEKRQQSKGSVGAHMTGAKQVGGKTEPAQSKTSN
QTTQEKTGVMK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgctttgggcgctctctggactccccgtgcacactagccttgctggtgggcttc
cagtttgcctttgtcctctatttctccctcgggggtttcaaaggcctggtgtctgtcctg
gtgcacaccacagagccggagtttgattactctcgacctcatgacgtctacaccaacctc
agtcatctgggagtaccgcctcccccgcctcgcaactctggcactggatcccctgccaca
ggaccaccactgagagactgccagatcccctctccactgctggtcggacctgtgtctgtc
catctgtcctctcctctgtctctggaggacatcagacagaggaatccattggtgatgcca
ggcggacgctatcggcctccagactgtgaaccccgccaccacacagcgatagtggtacca
taccggaaccggcagacccacctccgtgccctgctctaccacctccaccccttcctgcag
agacagcagatccactacagcatctatatagtgcagcagtgggggaatggtacttttaac
cgagccaagctgcttaacgttggggtgcgggaggccctcagagatgaagactggagctgc
atcttcctgcatgatgttgacttgctgcctgagaacgaccacaacacctacacctgccac
aagcagttccccacacacctgtctgtggccatggacaagttcagatacaggctgccgtac
ccgcagtattttggtggggtgtctgcagtaaccccagatcagtacatgaagatgaatggc
tttcccaaccagtactggggctggggtggagaggatgatgacattgctgccagagttcgt
ctatctggcatgaagattgtgcgccctccagtggccattggtcattacaagatgatcaag
cataaaggagacagaggcaatgagcaaaacccacgcaggtttgaccttctgaaaaggacc
agacttaactggcgctctgatggcctcaactctctgacctatgagctcctttccaaacag
ctggagcctctctacaccaacctcacggtcaacattggagaagacccccgtctgcctccg
ggaaaagcacccatccctctgaaaacaacaaccccggtccaccaacgtagcaccagcaag
acggaaggcacaggcaaacaggaaaagagacaacagagcaaagggtctgtgggggcacat
atgactggggcaaagcaggtcggtggaaagacagaacctgcacagtcaaaaacatcaaat
caaacaacacaggagaagaccggtgtgatgaaatag
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