Seriola dumerili (greater amberjack): 111219497
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Entry
111219497 CDS
T05606
Symbol
rnf123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111219497 (rnf123)
Enzymes [BR:
sdu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111219497 (rnf123)
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111219497 (rnf123)
Multi subunit type E3
KPC complex
111219497 (rnf123)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_RNF123
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
111219497
NCBI-ProteinID:
XP_022597909
LinkDB
All DBs
Position
Unknown
AA seq
1307 aa
AA seq
DB search
MSSKGGGTALTRRNYRLSSDTDKPKATGIVNEKLLSDYLYHVFPSDKQGPAVASLRKPLG
FQDLGAHLERLLSEGEPTEESRGKDQATEGRLGPQPVVLDHTSGFEGLLFVDDDLLGVIG
HSNFSSIRATTCVYKGKWAYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNR
VRKWNVTTTNYGKSWAAGDIVSCLIDLDEGTITFCLNGQSLGTAFTNIKTGPGVAYFPAI
SLSFKESVAFNFGSRPLRYPVDGYLPLQNPPAADLMKAHKLLGYIKNVLSTAIDTQEERL
VEKDCAVWRLQGEPTVLVTLAHIFNHFAPLMCKVYLVEDVLMNFLLGILEGGGSVDEHPL
IQQLLDLFWLLMEDYEVNECLKQLMMSLLRAYRFSPIIPDLGFQIHYLRLTTAILHHEKS
RKYLLNNVLFDVLRSVVFFYIKTPLRVKEAGLEELIPTTWWPTHFDKEGKDEREPKDESA
DERLRRRAYERGCQRLKKRIEVVEELQVQILRLLLNNKDKTTGEASRYIFLNKFRKFLQE
NASNRGHPTALCPPEYMVCFLHRLITAVRACWDEGNRKSPGSVSSEEAYVPPQLFYNGKV
DYFDLQRLGGLLSHLKKTLKDDLASKANIIIDPAEIQATSMDDLDEDEESGAAQVCRPFG
AAAMGGALARPSWLSSPTLGRANRFLSTAAVSLMTPRRPLTQPEKVKVRTLAVEQRTEED
IEGSHGNDGLLLGRPLEEPDQAIADKSLLEIVDGIVMMYNLSVHQQLGKMVVVSDDVHEY
AVALKDTEEKIARCPARRPDILEELQKSQKVFAEKLNHLSRRLAWINATIYSKEKMLDVY
WLLCVCIRTIEHADNTGSLFAFAPEFYLNVAMNAYSALKNYFSPANSMEELPGYEETLTQ
LAAILAKHFADPRIVGTDIKDSLMQALASYVCYPQSLRAVERIPEEQRVAMMRNLLAPYE
QRPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPSLLLQRHMAQLL
SMDKDMAASFLNSVLNQLNWAFSEFIGMIQEIQQAAERPERNFVDTRQLKVCATCFDLSV
SLLRVLEMTVTLVPEIFLDWSRPSAELLLRRLAQLLNQVLNRVTAEKNLFDRVVNLRLPG
LESVDHYPILVAVTGILVRILVDGDRQGISRAASVLLSDPCFQLHSIQHLLGEPIPSATG
NTGSSERKHFSLHAYTDYISEEEKQKVELMLAFLTEESKQAAASTAPTSEEDLCPICYAH
SISAIFKPCSHKSCKACINQHLMNNKDCFFCKATITGVEDYSKPTTS
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgagctctaaaggaggaggcaccgctctgacccgcagaaactacagactgtcttcagac
acagacaaacccaaagctacaggtatagtgaatgagaagctactgagtgactacctgtat
catgtgtttccttctgacaaacaaggacctgcagtggcctccctcaggaagcctctcggt
ttccaggatcttggtgctcacctggagagacttctgtctgagggagagcccactgaggag
agcagaggtaaagatcaggctactgaaggtcgtctgggtcctcagccagtcgtcctggat
cacaccagcggttttgaaggacttctgtttgtcgacgatgacctgttaggggtcatcggc
cacagcaacttcagctccatcagagccaccacatgtgtttataaagggaagtgggcgtac
gaggtgctgatctcctcccagggtctcatgcagatcgggtggtgtactctcaactgtcgc
ttcaaccaggaggagggtgtgggcgacacacctgattcatacgcgtacgatggaaacaga
gtgagaaagtggaacgtgaccaccactaactacggaaagtcgtgggcggcaggagacatc
gtcagctgtctgatagacctggacgagggaaccatcacattctgcctgaatggccagtct
ctgggcacagcgttcaccaacattaagacgggtccaggtgtcgcatactttcctgccatc
agcctctcctttaaagagtcggtggctttcaactttggcagcagaccgctcagatacccc
gtggacggctacctgcccctgcagaaccccccagctgcagacctgatgaaagctcacaaa
ctgctgggctacatcaagaacgtcctctccaccgccatcgacacacaggaggagaggctg
gtggagaaggactgtgcagtgtggaggcttcaaggagaacccaccgtcctcgtcactctg
gctcacatcttcaaccactttgctccactcatgtgtaaagtctacctggtggaggatgtg
ctgatgaacttcctgttggggattctggagggaggaggttcggtggatgaacatccgctt
atacagcaacttctggatctcttctggctgctgatggaggactatgaagtgaacgagtgc
ctgaagcagctgatgatgtccttgctgagggcctatcgcttctctcccatcataccagac
ctgggcttccagatccactatctgcgtctgaccacggccatcctgcatcatgagaagtcc
agaaaatacctgctcaacaatgtcttgtttgatgttctgcgttcagttgtgtttttttac
atcaagactcctctgagagtgaaggaggcggggctcgaggagctcatcccgaccacctgg
tggcccacgcactttgacaaggagggtaaagatgagcgtgagcccaaagatgagagtgca
gatgaacgtctgaggcgtcgagcgtacgagcgaggctgtcagagactcaaaaagaggatt
gaagtggtggaagagttgcaggttcagatcctgaggttgctgctcaataacaaagacaaa
acaacgggagaagcctctcgctacattttcctcaacaagttcagaaaattcctccaggaa
aacgccagcaacagagggcacccgacagctctgtgtcctccggagtacatggtgtgtttc
ctccaccgcctcatcacggctgtgagagcgtgctgggacgaagggaacaggaagagtcca
ggcagcgtcagcagtgaagaggcctatgtccctccccaactcttctacaacgggaaggtg
gactactttgacctgcagagactgggggggctcctctcccacttaaagaaaacactcaaa
gatgacttggccagcaaagccaacatcatcatcgaccccgcagagatccaggccacgtct
atggacgacctggacgaggatgaggagagcggagcagcacaggtttgtaggccgtttggt
gcagcagcaatgggtggagctctcgcgaggcccagctggttgagctctcccactttgggt
cgggccaaccggttcctgagcacggctgctgtcagtctcatgacccccagacgacccctc
actcagcctgagaaagtgaaggttcgcaccctcgctgtggagcagaggacggaggaggac
atcgagggaagccatggtaacgacggcctgttgctggggcgaccgctggaggagcccgat
caggcaatagcagacaagtccctgttggagatagttgatgggatcgtgatgatgtacaac
ctgagcgttcatcagcagctgggaaagatggtggtggtgtcagacgacgtgcacgaatac
gccgtggctctgaaggacacggaggagaagatcgctcgatgccccgcgcggagacccgac
atcctggaggagctccagaaaagccagaaggtgtttgcagagaagctgaaccacctcagc
aggagactggcctggatcaacgccaccatctactccaaggagaagatgttggatgtgtac
tggctgctgtgcgtttgtattcgcaccattgaacacgccgacaacaccggctccttgttc
gccttcgctccagagttctacctcaatgtcgccatgaatgcatacagcgcccttaagaac
tacttcagccccgcaaacagcatggaggaactgccaggctacgaagaaacattgactcaa
ctagctgctatccttgctaagcactttgcagatccacgcatagttggaacagatatcaaa
gactctctaatgcaggcactggccagctacgtctgctacccacaatccctcagggcggtg
gagaggatccccgaggaacaacgtgtcgccatgatgaggaatctgctggctccatatgaa
cagagaccctgggctcagaccaactggatcctggtcagactctggaggggctgtggtttt
ggctacagatacactcgcctgcctcatctcctgaagaccaaacctgaggacgccaacctg
cccagtctgcagaagccgtgtccgtcgcttctgctgcagagacacatggcgcagctgctg
agtatggacaaagacatggccgcctcgttcctcaacagtgtcctgaaccagctcaactgg
gccttctccgagttcattggcatgatccaggagatccagcaggcagcagagcgtccagag
aggaactttgtggacactcgtcagctgaaggtgtgcgcgacctgcttcgacctgtcagtc
agcctgctgcgtgtgctggagatgaccgtcactctggtccctgagatcttcctggactgg
tcccgcccctccgcagagctgctcctcagacgactggctcagctgttgaaccaggtgtta
aacagagtaacagcagagaagaacttgtttgatcgtgttgtcaacttaagactgccaggg
ctggaaagtgttgaccactaccccatcctggttgctgttacagggatcctggttcgaatc
ctggtggatggagacagacaggggatatctcgagctgcatccgtcctgctctctgacccc
tgtttccagctccactccatccagcatctgttaggagagcccatcccttcagccactgga
aacacaggctcctcagaacgcaaacacttctccctgcacgcatacacagactacatcagc
gaggaggaaaaacagaaggtggagctgatgttggcgtttctcacagaggagtccaaacag
gctgcagccagcacagctccaaccagtgaagaagacctctgccccatctgctacgctcac
tccatctctgccatcttcaagccctgctcacacaagtcctgcaaagcctgtatcaaccaa
catctgatgaacaacaaggactgtttcttctgcaaagccaccatcaccggggtcgaagac
tacagcaagcccaccacctcctaa
DBGET
integrated database retrieval system
