Seriola dumerili (greater amberjack): 111220282
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Entry
111220282 CDS
T05606
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1 isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04140
Autophagy - animal
sdu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111220282 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111220282 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111220282 (plekhm1)
Membrane trafficking [BR:
sdu04131
]
SNARE
SNARE associated proteins
Others
111220282 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
111220282
NCBI-ProteinID:
XP_022599036
UniProt:
A0A3B4UC92
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MLATQMPDTPPEAKDVKQIKEKLAQSLKALQKRYVTSDTVVTSEDGDANLLCCALEAIFI
HGIKSKYIRSESGGRTRKGDRGPLPQPFFWSLLKTVTHRDVITELEKISFVGTDVGRCRA
WLRLALNHGLLECYLASLFREDSELQAHYQPCALLLNTEEREVLLSYLQGLASLTFNLSY
KSAVLNEWTTTPLSLAGLCPFLQTDALDLPLNGGDHPTSKSTCKESWDTVSQSSGSSDAL
DMQRGCPVLLVGRGSNTLQGGRTALNSSNLSLDTTGSSQLSSSLSSDSLLQGQDPRSPTG
EQWSSCDLDLPINVNISSKRPQKDLLTEFRESRHCSQDSMREDSFVSSTGPDQFSETAVF
SGSESETQGPVTPSQDFANQSPDSALSDSEPPPTSLELPSSDEHHVNHAPSKVCDDASSE
FRSDTEVISTVSEPVEFVQPVKEVNVERSEPVRKEREAESSEKSTTDSSVHPGPRRSASI
LSRQLSSDSISHSRSWISEDDIYKPHLEEVSDNDETPPPAPTPEPKVSQSPPSVVHRRQI
GLSNPSRGLLKLGHLERRGAMGMWRDYYCELSPFEFRLYFNAEERMCCNNCSLVRCEEAR
ITSPEGRFELAFPGKRLYLRAANHGEAEDWVDRIVEAVNKCRPASCVDEQWEVLQPSSEN
GVDERTFSSPSSTPSSPEKSLSSTITGTCAGLEAPPLHQELDWTRTADLETDAIKEAVLY
FSTDPEARTWVPLIFSLSLEALKGFRIQGGRKFLQLTHPIEEIRDVVPDVSLGGPAFFKL
LTVRNTLRLRAENPEEARSWRALIRGALDSYLESGEDEGSEESAAAHMGVTGNLYRLVQH
KLKENGALLVHLCTVPSEKGLDTQSFKCAGCPQQIGPSRSRARLCEFSGQYYCDSCHHGD
TSIIPSRMVHNWDLTQREVSKKALRLLAQVQQEPLLNLEHLNPELVRHAESMAQAHELRQ
KLRLLGDYLLTCRSGAYKKLQARMGQRTYLLESSHLYSVADLRQIADGQYAPYLTTLTQF
ASNHVFHCDLCTQRGFICQICHADDTIFPFQFDSTTRCKDCKAVFHLVCKAPEGSCPRCL
RMKKYLERDLKED
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgctagccacacagatgccagacacgccacctgaggctaaagatgtcaaacagatcaaa
gagaaattggcgcagtcgctcaaggccctgcagaagcgatacgtaacgtcagacacagtg
gtaaccagcgaagatggcgacgctaacctgctctgctgtgccctggaggccatctttatc
catggtatcaagagcaagtacatccgctcggagtctgggggtcggactaggaagggagac
cggggccccctccctcagccgttcttctggagcctcctcaagaccgtcacccaccgtgat
gtcatcacagaactagagaagatcagctttgtgggcacggacgtgggtcgctgccgcgcg
tggctgcggctcgccctcaaccatggcctgctggagtgctaccttgcgtcgctgtttcgg
gaggactccgagctgcaggcgcactaccaaccctgtgccttgctcctgaacactgaggag
cgggaagttctgctcagctacctccagggtctggcctcacttacattcaacctgtcttac
aagtcagctgttctcaacgaatggaccaccacgcccttatctctcgctggactctgcccc
ttcttgcagacagatgcactcgacctgccccttaacggtggggatcatcccacctccaag
tccacatgcaaggaatcctgggacacggtgtctcagtcgtcgggctcatctgatgctctg
gatatgcagagagggtgcccagtgttgttggtcgggaggggatcaaatactttacaaggg
ggtaggactgcactcaactcatctaatttaagcctggacaccacaggctcctctcagctc
tcctccagcttgagctctgacagcctcctgcaggggcaggacccccgcagcccgacagga
gagcagtggtcctcgtgtgacctggacctgcccattaatgtcaacatcagcagcaagagg
ccacagaaagatttactgactgagttccgtgagagcaggcactgcagtcaggactccatg
cgtgaggactcctttgtctcaagcacgggtccggatcagttctcagaaacggccgttttc
agtggctcggaaagtgaaacccagggtcctgtcacgccatcccaagactttgcaaaccag
tccccagactctgcactttccgattcagagccaccaccaacctccctcgagctgccgtcg
tctgacgagcaccatgttaaccacgccccctcaaaggtgtgtgatgatgcctctagtgag
ttccgctcggacactgaggtgatctccacagtgagtgagcctgtggagtttgtgcagcct
gtaaaggaagtaaatgtggagaggagcgagcctgtccggaaagagagggaagcagaaagc
tctgagaagagcaccacagactcttctgtccacccagggccacgacgctccgccagcatc
ctcagcaggcagttgtcctcagattctatatcacattcccgttcctggatctctgaggat
gatatctacaagccccatctggaggaggtgtcggacaacgatgagacgccccctcctgct
cctacacccgagcccaaggtctcccagtcacctcccagtgtcgtccatcgcaggcaaata
gggctgtccaacccatctcgtggcttgctgaagcttggtcatctagagagacgaggtgca
atgggaatgtggcgcgactactactgcgagctgtcgccgttcgagttccgtctgtatttc
aatgcagaggagcggatgtgctgcaacaactgctccctggtgcgatgtgaggaggctcgc
atcacctcacccgagggccgcttcgagttggccttcccggggaagcgactgtacctcaga
gcggccaatcatggcgaagctgaggactgggtggaccggatagtcgaggcagtcaacaaa
tgtcgtccggcgtcttgtgttgatgagcagtgggaggtgctgcaaccatccagtgagaac
ggtgtagatgaacgcacattttcatccccgtcctcgaccccttccagccctgagaaaagc
ttatcatctaccatcacggggacatgcgcagggctggaggcacctcctcttcaccaggag
ttggactggactcggactgctgatttggaaacagacgccatcaaagaagccgttttatac
ttctctacagatcctgaggctcggacatgggtacctctgatcttctccctctccttggag
gccttgaaaggcttccggatacaaggggggagaaagtttctgcagctcacccatcccatt
gaggaaatccgggacgtggtgcctgatgtctccctgggaggaccggcctttttcaaactc
ttgacggtgaggaacacgcttagactcagggcggagaacccagaagaggctcgctcgtgg
agggctttgatccgtggagctctggactcttacctggagagcggagaagatgagggctct
gaggaatcagctgcagcacacatgggggtgactggaaatctctacagactggtgcagcac
aaactaaaagaaaatggagcacttctagttcatctttgcaccgtgccctcggagaagggt
ctggacactcagagcttcaaatgtgcagggtgtcctcagcagattggcccgtcccggagc
agagccaggttgtgtgagttctcgggccagtactactgtgactcctgtcaccacggtgac
acttccatcatcccttcacgcatggtgcacaactgggacctcacacaacgagaagtgtct
aagaaggccctgcggctgcttgctcaggtgcaacaggagcctcttctgaacctggagcac
ttaaaccctgagttagtgagacacgcagagtctatggctcaggcccacgaactacgacag
aagctacgtctgctgggcgactacctgctcacctgccgcagcggagcctacaagaaactc
caggccagaatggggcagcgaacgtacctgttggaatcgagccacctgtacagtgtcgca
gacctacgacagatagcagacggccaatatgcaccatacctgacgacgctgacacagttt
gcctccaaccacgtgtttcactgtgacctgtgcactcagcgtggcttcatttgccagata
tgccatgctgatgacaccatcttcccctttcagtttgatagcaccaccaggtgtaaagat
tgtaaagccgtgtttcacctggtttgtaaggctcccgaggggtcgtgccctcgctgtcta
cgaatgaagaaatacctggagagggatcttaaggaggactga
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integrated database retrieval system
