KEGG   Seriola dumerili (greater amberjack): 111220854
Entry
111220854         CDS       T05606                                 
Name
(RefSeq) tumor necrosis factor-like
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu04010  MAPK signaling pathway
sdu04060  Cytokine-cytokine receptor interaction
sdu04150  mTOR signaling pathway
sdu04210  Apoptosis
sdu04217  Necroptosis
sdu04350  TGF-beta signaling pathway
sdu04620  Toll-like receptor signaling pathway
sdu04621  NOD-like receptor signaling pathway
sdu04622  RIG-I-like receptor signaling pathway
sdu04625  C-type lectin receptor signaling pathway
sdu04920  Adipocytokine signaling pathway
sdu05132  Salmonella infection
sdu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    111220854
   04350 TGF-beta signaling pathway
    111220854
   04150 mTOR signaling pathway
    111220854
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    111220854
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    111220854
   04217 Necroptosis
    111220854
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    111220854
   04621 NOD-like receptor signaling pathway
    111220854
   04622 RIG-I-like receptor signaling pathway
    111220854
   04625 C-type lectin receptor signaling pathway
    111220854
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    111220854
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    111220854
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    111220854
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:sdu04052]
    111220854
   00536 Glycosaminoglycan binding proteins [BR:sdu00536]
    111220854
Cytokines and neuropeptides [BR:sdu04052]
 Cytokines
  Tumor necrosis fators
   111220854
Glycosaminoglycan binding proteins [BR:sdu00536]
 Heparan sulfate / Heparin
  Cytokines
   111220854
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 111220854
NCBI-ProteinID: XP_022599820
LinkDB
Position
Unknown
AA seq 244 aa
MEDECKVQLDATVSTEARKHTTQGVRPSSKLTTALLAFTLCLAFAAAAVLFFNTHTKERT
GQDEDTTDLHHTLRQISNGRPAIHLEGKHNESLSTSVEWKNNVDQSHATGGLKLENNEIV
IPRTGLYFVYSQASFRVSCTSSDADDATSKPMVHLSHTVKRWSSSYGGDNTENSYQTILH
SVRTACQKTASSAGDEEGNWYTAVYMGAVFNLRKGDRLKTVMEERMLLKLEDEPGKTFFG
VFAL
NT seq 735 nt   +upstreamnt  +downstreamnt
atggaagatgaatgcaaagtgcagctggatgccactgtctccacagaggccaggaaacac
acgacgcagggtgtcagacccagctcaaagctaaccacggccctgctggcgttcacgctc
tgcctcgccttcgctgccgctgccgtcctcttctttaacacacacaccaaggagcggaca
ggacaagacgaagacaccactgatcttcatcacaccttgaggcaaatttccaatggaaga
ccggccattcatttagaaggtaaacacaacgaaagtctgagcacttcagtggagtggaag
aataacgtggaccagtcccatgctacaggtggactgaagctggagaacaacgagattgtg
atccctcgaaccggcctctactttgtttacagccaagcgtccttccgggtcagttgcaca
agcagtgatgccgacgacgccacctcaaagcccatggtccacctgagccacactgtgaag
cgctggtccagctcgtacggaggcgacaacacagagaactcctaccagaccatcctccac
tctgtccgcaccgcctgccagaagacagccagcagcgccggggacgaggagggaaactgg
tacaccgccgtatacatgggggctgtgttcaacctgaggaaaggggacaggctgaagacg
gtgatggaggagaggatgctgctgaagctggaggatgagccggggaagacgttcttcggt
gtgtttgccttgtga

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