Seriola dumerili (greater amberjack): 111223957
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Entry
111223957 CDS
T05606
Symbol
iars
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111223957 (iars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sdu01007
]
111223957 (iars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdu03016
]
111223957 (iars)
Enzymes [BR:
sdu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
111223957 (iars)
Amino acid related enzymes [BR:
sdu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
111223957 (iars)
Transfer RNA biogenesis [BR:
sdu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
111223957 (iars)
Prokaryotic type
Other AARSs
111223957 (iars)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Plectin_PPL
PriX
DUF4238
Motif
Other DBs
NCBI-GeneID:
111223957
NCBI-ProteinID:
XP_022603997
UniProt:
A0A3B4UUW0
LinkDB
All DBs
Position
Unknown
AA seq
1268 aa
AA seq
DB search
MVEPVPESINFPSEEEKILQLWKDKDCFQECLKQSKNRPKYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNKQC
RNIVMRYSNEWESSVRRMGRWIDFKNDYKTLYPWFMETVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVIVCFPLVENQDVALIAWTTTPWTLPSNLALCVNP
EFLYVKVKDNTTEKTYIMMEARLGALFKSESEYTLLDKFPGKMLKGKKYKPLFEYFAKCG
EKGAFQVVMDNYVKEEEGTGVVHQAPYFGADDYRVCTEYNIIQRDQAPICPVDASGCFTS
EVTDFAGQYVKDADKNIIKWLKEKGRLVNASSFKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVDKLLDNNGKCYWVPEFVREKRFGNWLRDARDWAISRNRYWGTPIPLWVSDDYEEVVC
IGSTAELEELTGVKVTDLHRESIDSLTIPSRCGKGVLRRVTEVFDCWFESGSMPYAQVHY
PFENRKEFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPGLIVQNYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLVQNVQRLQKEDEIQFLYNENTAKQSDNIMDKWIQSFTQSLIQFFKAEMDAYRLYTVV
PRLVKFVDMLTNWYVRTNRRRLKGESGTEDCLWALETLFSVLFSMCRLMAPFTPFITEMM
YQNLRHLIDPASVDEKDTSSIHYLMMPQVRETLIDKRIESAVSQMQSVIELGRVIRDRKT
LPVKYPLKEVVVIHQDPEALKDIQSLQKYILEELNVRQLTLSTDKDKYGIRLRAEPDHMV
LGKRLKGAFKAVTASIKELTSEQLEAFQKTGSIMVDGHELHEEDLRLMYTFNQSSDSAAQ
YEAHSDAQVLVLLDVTPDQSMVDEGVSREVINRIQKLRKKGHLVPSDEITVYYRCQPAGE
YLDSVIQAHTDFILATTKAPLLPFPVPNTASVIIEEKTQLKGSDLELTIVKGSSAPQAPL
NGPACTYVNLRVKVNNKEQEGVVLLENPKGDNRLDVDKLKRVCKSIFGTNNTQLRFFSGG
TELTSKTDLQTLSGKTLSVTSGPSSPGPVATADAILCPYVNLLLCNAQPAECQTGEVGTL
LLVNPVGQNGLDYSGLLSEAAKVFGLRSRWLKLYLDQDLTQELPADASVKSLDTKTLFVR
VLPTTAQA
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccagtccccgagtccatcaactttccctctgaggaggagaagatcctgcag
ttgtggaaagacaaggactgcttccaggaatgcctcaaacagtccaagaacaggcccaag
tacaccttctacgatggccctccttttgccacaggtctaccccactatggtcacatcctg
gccggcaccatcaaggacattgttactcgctttgcccaccagagcggcttccatgtggac
cggcgctttggctgggactgccacggtctgcctgtggagtatgagattgataaaacattg
gggatcaaagggcctgaagatgtggccaagatgggcattgctgagtacaacaagcagtgc
agaaatattgtcatgagatactccaacgagtgggagagttcagtgaggcgaatgggcagg
tggattgacttcaagaatgactacaagactctctacccatggttcatggagactgtttgg
tgggtgttcaaacaattgtatgacaagggtctggtgtaccgaggtgtcaaagtcatgcct
ttctccactgcctgcaacacccctctctccaactttgagtcccaccagaactacaaggac
gttcaggatccatctgtgatcgtctgcttcccgctggttgagaatcaagatgttgctttg
attgcctggacgacaacaccctggacactgccgagcaacctggccctctgcgtcaacccg
gagtttctatatgtcaaagtcaaagataacaccacagaaaagacctacattatgatggag
gccaggttgggagcactgtttaagtcagagagcgaatacactctgctggacaaatttcct
ggcaagatgttgaaagggaaaaaatacaagcctctcttcgagtactttgccaagtgtggg
gagaaaggagcattccaggtggtgatggataactacgtcaaggaggaggagggcacagga
gtggtccaccaggcaccgtattttggagctgatgattacagggtgtgcactgaatacaac
atcatccagagggaccaggctcctatctgccctgtggacgcctcaggctgcttcacttca
gaggtcactgactttgcgggacagtatgtcaaagacgctgacaagaacatcatcaagtgg
ctgaaggagaagggccgccttgtcaatgccagcagtttcaagcatagttaccccttctgc
tggaggtctgatacgcccctaatctacaaagctgtccccagctggtttgtccgagtggag
cacatggtggataaactcctggacaacaatggaaaatgttactgggttccagagtttgtg
cgtgagaagcgttttgggaactggttgagagacgcacgcgactgggcgatttcaaggaac
cgttattggggcacaccaatccctctctgggtcagcgatgactacgaggaggtggtatgc
atagggtccacggctgaactggaggaactgactggagtcaaagtaactgatctgcatcgg
gagagcattgacagtctgacaatcccgtcacggtgtggtaagggcgtgctgcggagggtc
acagaggtgtttgactgctggtttgagagcggcagcatgccttacgcccaggttcactac
ccctttgaaaacaggaaggagtttgaggacactttccctgcagacttcatcgccgagggc
attgaccagacaaggggatggttctacaccctgttggtgctctccacagccctgtttggc
aaaccacccttcaagaatgtcatcgttaatggtttggtactcgctagcgatggacagaag
atgagcaagcgcaagaagaactacccagatccagggctgatagtgcagaactatggagct
gatgccctcagactgtacctcatcaactctcctgtagtgagagcagagaacctgcgtttc
aaagaggagggtgtgcgggacgtgttgaaagatgtcttcctgccgtggtataatgcctat
cgcttcctggtgcagaacgtgcaaaggttacagaaggaggacgagattcagtttctgtac
aatgagaacacggcaaagcagagtgacaacatcatggacaaatggattcagtccttcaca
cagtctctcattcagttcttcaaggctgagatggatgcgtaccgcctctacactgtcgtg
cctcggctggtcaagtttgtggacatgctcaccaactggtacgtcaggaccaacagacgc
cgtctgaagggagagagcggcactgaggactgcctgtgggcgctggaaaccctcttcagt
gttctgttctccatgtgcaggctgatggctcccttcacacccttcattacagagatgatg
taccaaaatctgcgtcacctcatcgaccccgcctctgtcgatgagaaggacactagcagc
atccactatctcatgatgccccaagtcagggagactttgattgacaagcgcattgagagt
gctgtctctcagatgcagtctgtgattgagctgggcagagtgatccgagacaggaagacc
ctgcccgtcaagtacccattgaaggaggtggtagttattcaccaggatccagaggctctg
aaagacatccagtccctgcagaaatacatcctggaagagcttaatgtgcgacagttgaca
ctgtcaacggacaaggacaagtacggtatccgtctgagagccgagccagaccacatggtg
ctgggcaagagactaaagggggccttcaaagccgtcactgcttctatcaaggagctcacc
agcgaacagctagaggccttccagaagacaggatccatcatggtggacggccacgagctt
catgaggaagacctgaggttgatgtacaccttcaaccagagctcagactcagctgcacag
tatgaagcgcattctgacgcacaggtgctggtgctgttggatgtcaccccagaccagtcc
atggtggatgagggtgtctcccgcgaggtcattaaccgcattcagaaactacgcaagaag
ggccacttggtgccatcagatgagataactgtgtactaccgctgccagccagcaggggag
tacttggactctgtgatccaggctcacactgactttatcctggctaccaccaaggctcca
cttctgcccttccctgtccccaacactgccagtgtcatcatagaggaaaagactcagctg
aagggttcagacttggagttaaccattgtaaagggatcttcagcccctcaggcccctcta
aatggaccagcttgcacctatgtgaacctcagggtgaaagtcaacaacaaagaacaagag
ggggtggtgctgttggagaaccccaaaggagataacagactagacgtggacaagctgaag
agagtgtgcaaaagcatctttggaacaaataacacccaactcagattcttcagcggtggg
actgagttgaccagcaaaacagaccttcagactttgagtggtaaaactttgtcagtgacg
tcaggcccttcctcccccggtcccgtcgccaccgccgacgccatcctgtgtccttacgtt
aacctgctactctgcaatgcacagccagctgaatgccagacaggagaggtgggcaccctc
ctgctggtgaacccagtgggccagaatgggctcgactactcaggcctcctgtctgaggct
gccaaggtcttcggccttcgcagcagatggctcaaactctacctggaccaggacctcacc
caagagctgccagctgatgcatcagtaaaatctctcgacaccaaaactctgtttgtcaga
gttcttccaacaacggcccaggcataa
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