Seriola dumerili (greater amberjack): 111226471
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Entry
111226471 CDS
T05606
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04010
MAPK signaling pathway
sdu04020
Calcium signaling pathway
sdu04510
Focal adhesion
sdu04540
Gap junction
sdu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111226471 (pdgfrb)
04020 Calcium signaling pathway
111226471 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111226471 (pdgfrb)
04540 Gap junction
111226471 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
111226471 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sdu01001
]
111226471 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sdu04090
]
111226471 (pdgfrb)
Enzymes [BR:
sdu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
111226471 (pdgfrb)
Protein kinases [BR:
sdu01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
111226471 (pdgfrb)
CD molecules [BR:
sdu04090
]
Proteins
111226471 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Adeno_E3_CR1
VEGFR1-3_N_Ig-like
Ig_VEGFR-1-like_5th
Haspin_kinase
RIFIN
Motif
Other DBs
NCBI-GeneID:
111226471
NCBI-ProteinID:
XP_022607365
UniProt:
A0A3B4TFU3
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MRRVAASTHLTVTVTVLLYLCAELCCLEITPDDKELVLAEGSSLNLTCSGSGETTWEFKR
EDVPYIQAEQDHNGGQNFQILQIGTTSSVLTMWNVSWRNTGAYQCTDRHTGETKEVVVFV
PDPDVWFIESSHGMVTRTSEESTIPCVVTNPKISVALYERDTDMPIRGHYIPSEGYKAPL
EDRTYVCRGELNGEEKESQDFNVVSIVVPEAIDAYVNASKTVLIQGEPLSVNCTVHGVEL
VFFSWDIPNREIIELKPQTEVQLAAMKMHSYLIFPRATMAHSGNYVCHALDSVLDQTASA
SVNITVLERGFVDVKTAQQQNISAKLQENVELRVEIEAYPPPQVRWSKDGATIKGDKTIP
TRDEHEIRYVTILTLVRVRTEQKGRYTVLVSNGDDAKEVTFDLEVRVPSQIKDLIDHHLP
GKRHLVTCVAEGVPTPTIQWYSCDSMHKCSNQTAVWQPLIPEPEELSIQTNVNYSETRKT
SQVRSQVIFHKPQQVTVRCETSNQAGLVDRRDVKLVSSTLFSQVAVLAAVLALVVIVILS
FIILIAVWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMPRDNLVLGRTLGS
GAFGRVVEATAYGLTHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLL
GACTKHGPLYLVTEFCRYGDLVDYLHRNKHTFLQYYAEKNPDNGCLISRGSTPLSQRKGY
VSFGSESDGGYMDMSKDEPSVYVPMQEQMDTIKYADIQPSPYESPYQQDIYQEQGGGRLD
LVISDSSTLTYDDLLGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLAR
DIMHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPM
NELFYSALKRGYRMTKPAHASDEVYDIMKKCWDEKFEKRPEFSFLVHSVGNMLTDSYKKR
YNQVSDNFMKSDHPAVTRTKPRLSSPFPIANPSFGSPSSVTLSFPPDPYNQSPSPGEFRQ
EADTQEVITSYNEYIIPIPDPKPEEVFTDEPSESPASSLALEEETDSMSQDTADTLPEED
RLEETSERDALLGSSGTPEVEDSFL
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgaggagggtggcagcgtccacacatctgacagtcactgttactgttctgttgtatctc
tgcgctgagttgtgttgcctggagatcacacccgatgacaaagagctggtcctggccgag
ggctcttctctcaacctcacctgctctggctcaggggagacgacctgggagtttaagagg
gaggatgtgccgtatatccaagcggaacaggatcataatggtggtcaaaacttccaaatt
ttgcaaatcggcaccacctccagtgttttgaccatgtggaacgtgagctggaggaacaca
ggggcgtatcagtgcactgaccggcacactggagaaactaaggaggtggtcgtgtttgtc
ccagaccctgatgtgtggttcatagagagctcccatggcatggtaactagaaccagcgag
gaaagcaccatcccctgtgtggtcaccaacccaaagatcagcgtcgccctgtatgagagg
gacactgacatgcccatcaggggacattatattcccagtgaggggtacaaggcaccgctg
gaggacaggacctacgtgtgtcgtggagagctgaacggggaggagaaagagtctcaggac
ttcaacgttgtcagcatcgtcgtccctgaggccatcgacgcctacgtcaatgcgtcaaag
accgtcctgatacagggcgaaccgctgtcagtaaactgcacagtgcacggagtggagcta
gtctttttttcctgggatatccccaacagagagattattgagttgaagccgcagacggag
gtccagctggccgccatgaagatgcactcctacctgatcttcccccgtgccacgatggcc
cacagcggaaactacgtctgccatgcccttgatagcgtcctggaccagactgcctctgcc
agcgtcaacatcactgtgctcgagcgaggcttcgtggacgtgaagactgctcagcaacaa
aacatttcagccaagttgcaagagaacgtggagctgagagttgagatcgaagcctaccct
cccccccaggtccgctggagcaaagacggcgccaccatcaagggagacaaaaccatccca
accagagacgagcacgagatcaggtatgtcactattctcactttagtgagggtgagaacg
gagcagaaagggcgctacaccgtcctcgtctccaacggcgatgatgcaaaggaagtgacc
tttgacctggaggtccgagtcccctctcagattaaagacctgattgaccaccacctcccg
gggaagagacacttggtgacctgtgtagctgagggggtcccaaccccaaccatacagtgg
tacagctgtgacagcatgcacaagtgtagcaaccagacagcggtgtggcagccgctgata
ccagagccagaggagctgagcatccagaccaacgtgaactacagcgagactcgtaaaacc
agtcaggtccgcagccaggtgatcttccacaagccccagcaggtcacagttcgctgcgag
accagcaaccaggcagggctcgtcgacagaagagacgttaaactggtgtccagcacgctg
ttctcccaggtggcagtattggctgctgttctcgccttagtggtaatcgttatcctgtct
ttcatcatcctcatcgctgtgtggaggaagaaacctcgctatgagatcagatggaaggtg
atagagtctgtgagtcaggatggtcatgagtacatctatgtggaccccatccacctgccc
tatgacctggcctgggaaatgccgcgagacaacctggtgctgggtcgcactcttggatca
ggagcctttggcagggtggtcgaggcaactgcatatggtctcacacattcccagtccagc
acaaaagtggcagtgaaaatgctgaagtccacagccaggaggagtgagacccaggccctg
atgtcagagctgaagatcatgagccacctgggtccacatcttaacatcgtaaacttgctg
ggagcttgcactaaacacggccctttgtacctggtgactgagttctgtcgctatggcgac
ctggtggactacctgcacaggaacaagcacacctttctgcagtactacgctgaaaagaac
ccagacaatggctgcctcatctcaagaggaagcactccactcagccagaggaaaggttat
gtgtctttcggaagtgagagtgatggaggatacatggacatgagtaaagacgagccctca
gtctacgtgcccatgcaggagcaaatggataccatcaagtatgcagatatccagccctct
ccatacgagtccccctaccagcaagacatctatcaggaacaaggtggtggcagattggac
ctggtcatcagtgactcctccactctcacctacgatgatctgttgggctttagctaccaa
gtggcaaaggggatggagttcctcgcctccaagaattgtgtacatcgagacctcgctgcg
aggaacgtcttgatctgtgagggcaaactggtgaagatctgtgacttcggcctggccaga
gacatcatgcatgactccaactacatctctaaaggcagcaccttcctgcctctgaagtgg
atggcaccagaaagtatttttcataatttgtacaccaccctgagcgatgtttggtcatac
ggcattcttctttgggagattttcacattgggaggaaccccctaccctgatttgcccatg
aacgagttattctacagcgctttgaagagaggctaccgaatgaccaaacccgcccacgcc
tctgatgaagtttatgacatcatgaagaagtgctgggatgaaaagttcgagaagaggcct
gagttctcatttttggtgcacagtgtggggaacatgctgacagacagctataaaaagaga
tacaaccaagtcagcgacaacttcatgaagagcgaccacccggcagtcactcgcaccaaa
cccagactctcatcaccctttccgatcgccaatccatcatttggctccccctcgtccgtc
accctctccttccccccggacccctacaaccagagcccgagcccaggagaattcagacaa
gaggcagacacgcaggaagttataacttcatacaacgagtacatcatccccatcccagac
cccaagccggaggaggttttcactgacgagccatcagaaagccctgcaagttctctggct
ctggaggaggagacggactccatgtctcaggacacggctgacactcttccagaggaggac
aggctggaggagaccagtgaaagagacgctctgctgggctcctccgggacgccggaggta
gaggacagcttcctgtag
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integrated database retrieval system
