Seriola dumerili (greater amberjack): 111229196
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Entry
111229196 CDS
T05606
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111229196 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111229196 (nthl1)
Enzymes [BR:
sdu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
111229196 (nthl1)
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111229196 (nthl1)
Prokaryotic type
111229196 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
111229196
NCBI-ProteinID:
XP_022611131
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MTSPYFMQSRSVVTRIPGCRPAASLGSKLNRRRNVDPVPSVAVKVEVEEARISEQRPSSA
PSSTGGCHELPQHAPVQPKTEADTLPLSSHRRRRRQLKVEYDKDEGVPPVKTEHWEPPDW
KKQLGFIREMRSGRDAPVDNMGAEKCYDTGAPAHVRRFQVLVSLMLSSQTKDQVTAAAMQ
KLRAHGCTVENILNTDDETLGKLVYPVGFWRNKVKYLKLTSAMLQKEFGGDIPKSVEGLV
RLPGVGPKMAHLAMAIAWDQVSGIGVDTHVHRISNRLGWLKKPTKNPEETRKALEEWLPR
ELWSEINWLLVGFGQQVCLPVNPLCSVCLNQHSCPSAHKNSPTKRPKARSPRSPDPTSSL
KIKTESGQNSAAKDDRTKEESLPTPVSPTRQRRRLKTKVNY
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgacttctccttacttcatgcagagcagatctgttgtcactcggattcctggctgtaga
cccgcggcctctctggggtccaaactcaacagacggaggaatgtggatccagttccctct
gtggcggtgaaggtagaggtggaggaggcgaggatctctgagcaaagaccctcctctgcc
ccttcatcgacgggtgggtgccatgaactcccccaacatgctcctgtgcagccaaaaaca
gaagcagacactctcccgctgtcttcacacaggcgcaggaggagacagctaaaggtggaa
tatgacaaggatgaaggcgttccaccggtgaagacagaacactgggaacctcccgactgg
aagaaacaattaggattcattcgtgagatgaggagcggccgagacgcacccgtagataac
atgggagcagagaaatgctatgacacaggagctcctgcacatgtgagacggttccaggtg
ttggtgtcactcatgctatccagtcagaccaaggaccaggtgacagcagcagctatgcag
aagctccgagcacacggctgcactgtggaaaatattctcaacactgatgatgaaacactg
ggaaaactcgtctaccctgtcggcttctggaggaataaagtgaagtatctgaagctaacg
tcagccatgctgcagaaagagtttggaggggacatcccaaagagcgtggaagggctggtc
cgcctgccaggagttggccccaaaatggctcacctggctatggccatcgcctgggaccag
gtgtccggaataggtgtggacacacacgtgcatcgcatctccaataggctgggctggctc
aagaagccaaccaaaaacccggaggaaacacgcaaggccctggaggagtggttacccagg
gagctgtggagtgagatcaactggctgctggtgggttttggacagcaggtttgtctaccc
gtcaacccgctctgttcagtgtgtctgaaccagcacagctgtccgtcagcccacaagaac
tctcctacaaagaggcctaaagctagatccccacgctccccggacccaacttcctccctt
aaaataaaaactgaatctggacagaactctgctgctaaagatgacaggacaaaggaggag
tcactgcccacacctgtttcccccaccagacagagaaggaggctaaaaactaaggttaac
tattaa
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