KEGG   Seriola dumerili (greater amberjack): 111229702
Entry
111229702         CDS       T05606                                 
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like isoform X1
  KO
K20813  thymine-DNA glycosylase [EC:3.2.2.29]
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    111229702
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdu03400]
    111229702
Enzymes [BR:sdu01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.29  thymine-DNA glycosylase
     111229702
DNA repair and recombination proteins [BR:sdu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     111229702
SSDB
Motif
Pfam: UDG AT_hook Ndc1_Nup
Other DBs
NCBI-GeneID: 111229702
NCBI-ProteinID: XP_022611856
LinkDB
Position
Unknown
AA seq 421 aa
MEENQYTSLTVPTDYFQQWYQSSQQHPEAQHVMPYHNMGHYTEDPRDEPVMAELSVHREP
PLYQEPFYQNYPAAPNHYQEPMYQQNVREQQQQHQQQQQQQQHLAVLHHPQHHHNIQQQE
LSVQHQPQPAGPPPAVTPVKKKRGRPPKHQAEEGETQEEEDEAEAAKKAKRVLNRFNGMS
VAEVMAKTLPDVITYNLDILIIGINPGLLSAFKGHHYPNPGNHFWKCLFLSGLTEEQLNY
MHDQSLPEKYSIGFTNMVERTTPGSKDLSSKEIREGGRQLLDKLQKYKPLIAAFNGKGIY
EIFCKETFGVKAKNLEFGLQPYKIPETETVCYLMPSSSPRCAQFPRAQDKVHFYIKLKEL
RDQMKGLGPSHEVMETQYSFDLQLAKEDAKRIAIKEEQVDPEYESCSGLHHNARQSSNIT
N
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggaggaaaaccagtacacatcattgacggttcctacggattattttcagcagtggtac
cagtccagccagcagcatcctgaggcgcaacatgtgatgccatatcacaacatgggccac
tacacagaagatcccagagatgagcctgtcatggctgagctatcagtccatcgagagcca
cctctttaccaggaacctttttaccagaactatcccgcagccccaaatcactatcaagag
ccgatgtaccagcagaacgtcagggagcagcagcagcagcatcagcagcagcagcagcag
cagcagcatcttgcagtcctgcaccaccctcagcaccaccataacatacagcagcaggag
ctgagtgtccagcaccagcctcagcctgctggtccacctccagctgtgacaccagtgaag
aaaaagagaggccggcctccaaaacaccaggcggaggagggcgagacgcaggaagaggag
gacgaggctgaggccgccaagaaggccaagagggttctcaaccgctttaacggcatgtca
gtggctgaggttatggccaaaaccctgcctgacgttattacctacaatcttgacattttg
ataattggaattaacccaggactattgtcagccttcaaaggacaccattacccaaaccca
ggaaaccatttctggaaatgtctgtttctctctggtctgactgaagagcagctcaactac
atgcacgatcagagcctgccggagaaatacagcatcggcttcaccaacatggtggagagg
accacacctggcagcaaggacctctccagtaaggagattcgtgaaggaggtcgacagtta
cttgacaagctgcagaagtacaagccattaatagcagcttttaatggcaaaggtatttat
gaaatcttctgcaaagaaacctttggtgtgaaggcaaagaatctggagttcggtctgcag
ccctacaaaatcccagagactgaaacagtgtgctacttgatgccctcatcaagccctcgc
tgtgcccagtttccccgtgcgcaggataaggtgcatttctacatcaagctgaaggagctg
agggaccaaatgaaaggcttgggacccagtcacgaggtgatggagacacagtactccttc
gacctgcagctggctaaagaggatgccaagaggattgcaatcaaagaagagcaggtggat
ccagagtatgaaagctgtagtggtctccaccacaacgcgaggcaaagcagcaacatcacc
aactaa

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