Seriola dumerili (greater amberjack): 111230342
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Entry
111230342 CDS
T05606
Symbol
smcr8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111230342 (smcr8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111230342 (smcr8)
Membrane trafficking [BR:
sdu04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
111230342 (smcr8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
111230342
NCBI-ProteinID:
XP_022612757
UniProt:
A0A3B4V644
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MIGSPDVVAFTKEDEYGQTSPDPWALPEEFSIPLHPLADSNPWAKTSYAKFTKDFILISE
FSEQVGPQPLLTIPDDPKVCGTFDLNYFSLRIMSVDYQASFVGHPPGSGYPRLSFVEDSR
VVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSADERKIMLQFQELSLRFSQASEC
LKAGNRRAFAKELQRKLRDLEYTHSVLQREEGLQREAGPQCMYSAHAVEKANELANVEKS
IYEHRDLLRQISSYHCRPRRDPHAVTCQKCMTECLSECEALLDKYAKLANPFSYTDKGGK
GEEGQVNVEGGEEEVEEDVKRRPSYTPQLIKAKSAKCFDKRLKTLQELCDQTFYGATVEL
LKETERSFRGDLCYLHTRRLDKTLRRRQRVTNFLFEEDLGDDDEDEGGTLRPFCAVNHAV
DNYTLLNPPPIVLGPEPLELDSLEPPDPLDPASETSHTQESELGLGESHLESSPSDQTLE
TQESSEETKGSFSSDKSGMGPAQKHESLASVRSEPPDPDSDLTLDPDHNADLERESSSEE
TTAGEDEGDQTPVSLLEVVSELEASREDDCERGSDGACEMESDLLVPIDTACCMAQEGFL
YEASAPEADLHLGQSSHHQPSHTLVVNQEPQALLPLQDDYTVGSPCSESPAAGLELPVGL
LGDAVSHTSVEDGSDCTMSASTGSDRAASPLGYGGVVTLRQRKKAGQGALRFVRQYPFAI
QALWCLLSGRTLVVLGADEGRVRRLVAALALFVPGPGKCGERVQAWLSCPFTLTDLQRWK
LVGLQRVASPVGSSMLYSLSRYSRYISILDADQKTLRCPPYRGQLLANVADHRTYIRRGS
TYFLHVQSTLCRMAAKAFLFTFTHHLHLPVSSAEGPEVVEGRRRCFLQEQLGLGEEDSQI
LLYLSQLVTQQYLQPATGGSAAAAPCFSFNYTTSVLYKI
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgataggctcacctgacgtggtggctttcactaaagaggatgagtacggccagacaagt
ccggacccctgggctctccccgaggagttctccatccctctccatcctctggccgactcc
aacccctgggccaaaacctcctacgccaagttcaccaaagacttcatcctcatctctgag
ttctccgagcaggtgggccctcagccgctcctcaccatcccagatgaccccaaagtctgt
ggcaccttcgatctcaactacttctccctgcgcatcatgtcggtggactaccaggcctcc
ttcgttgggcacccgcctggcagcggctacccgagactcagctttgtggaggactcgagg
gtggtgctgggcgactcgaaggagggggcgttcgcctacgtccatcaccttactctgtat
gacctggaggcgaggggctttgtgcgaccgttctgcatggcgtacgtttcagcagatgag
aggaaaatcatgctgcagtttcaggagctgtccctccgcttctctcaggcctctgagtgt
ctgaaggccgggaacaggagagccttcgccaaggaactccagaggaagctgcgggacctt
gagtacactcactccgtgctgcagagggaggagggcctgcagagagaggcggggcctcag
tgcatgtactccgctcacgctgtggagaaagccaatgagcttgctaacgtggaaaagagc
atctacgaacacagagacctgctgagacagatcagctcctatcattgccgcccgcgccgg
gatcctcacgctgtcacctgccagaagtgcatgactgagtgcttgagtgagtgtgaggcg
ctgttagacaaatacgccaagctcgccaaccccttcagttacaccgacaaaggggggaaa
ggggaggaaggtcaggttaacgtggaaggaggtgaagaggaagtggaggaggacgttaaa
cgcaggccgtcctacacaccacagctgatcaaagccaagtctgccaagtgtttcgacaag
cgcctgaagaccctccaggagctgtgtgaccagactttctacggggccaccgtggagctc
ctgaaggagacggagaggagtttccggggcgacctgtgttaccttcacacacgccgcctt
gacaagactctgcgcaggagacagagagttaccaacttcctgtttgaggaggatctcggt
gatgatgatgaggatgaaggaggaacgctaagaccgttttgtgctgtgaaccacgctgta
gacaactatacactcttaaatccacctcctattgtgctgggaccagaacctctagagctg
gactcactggagcctccagatcctttagacccggcctctgagaccagccatactcaggag
agtgagcttgggctcggggagagccacctggagtcctccccctcagaccagactctggag
acccaggagagctcagaggagaccaaaggaagctttagcagcgataagagcgggatgggt
ccagcacagaagcacgaaagtcttgctagtgtgaggtcagaacctcccgatcctgattcc
gacttaacccttgaccccgaccacaacgctgacctggagagggagagcagcagtgaagag
accactgcaggggaggatgagggagaccagacgccggtgtctctgctggaagtggtgtcc
gagctggaggccagcagagaggacgactgtgagagaggaagtgatggggcttgtgagatg
gagtccgacttgttggttccaatagacactgcgtgctgtatggctcaagagggtttcctg
tatgaggcgtctgccccagaggcggatcttcatctgggccaaagctcccaccatcagccc
tctcatacgctggttgttaaccaggagccacaggccctccttccactccaggacgactac
actgtgggttctccgtgctctgaaagccctgcagctgggctggagctgcccgtggggctc
ctgggagatgcagtttcccatacctcagtggaggacgggtcagactgcaccatgagtgct
tctacagggtccgatcgggctgcctcgcctctgggctatgggggggtggtgaccctgcgt
cagaggaagaaggctggacaaggagccctgaggtttgtgcgacagtacccctttgccata
caagctctgtggtgcctgctgagtggcagaaccctggtggttctcggggcagatgagggg
agagtccgtcggttggttgctgctctggccctctttgtgcctggccctgggaagtgtgga
gagagggttcaagcctggttgtcctgccctttcacccttactgacctgcagaggtggaaa
ctcgtcggattgcaaagagtggcgtcccctgtgggttctagcatgctttactcgctgtcc
cgctacagtcgctacatctccatccttgacgccgaccagaagactttgcgctgcccgccg
tatcgtggccaactgcttgccaacgtagccgaccaccgcacctacatccgccgtggctcc
acctacttccttcacgtacagagcaccctgtgtcgcatggcagccaaggccttcctgttc
accttcacccaccacctccacctgccggtcagctccgcggaggggccagaggtggtggag
ggccgacgccgctgcttcctgcaggagcagctggggctgggcgaggaggacagccagata
ctgctctacctcagccagctcgtcactcagcagtacctacagcctgccaccgggggcagc
gcagccgcagcaccttgttttagttttaactacaccaccagcgttttatacaaaatctaa
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