KEGG   Seriola dumerili (greater amberjack): 111230345
Entry
111230345         CDS       T05606                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu03420  Nucleotide excision repair
sdu04110  Cell cycle
sdu04114  Oocyte meiosis
sdu04120  Ubiquitin mediated proteolysis
sdu04141  Protein processing in endoplasmic reticulum
sdu04310  Wnt signaling pathway
sdu04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111230345 (rbx1)
   04120 Ubiquitin mediated proteolysis
    111230345 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    111230345 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    111230345 (rbx1)
   04350 TGF-beta signaling pathway
    111230345 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    111230345 (rbx1)
   04114 Oocyte meiosis
    111230345 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sdu04121]
    111230345 (rbx1)
   03400 DNA repair and recombination proteins [BR:sdu03400]
    111230345 (rbx1)
Enzymes [BR:sdu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     111230345 (rbx1)
Ubiquitin system [BR:sdu04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   111230345 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     111230345 (rbx1)
   Cul2 complex
     111230345 (rbx1)
   Cul3 complex
     111230345 (rbx1)
   Cul4 complex
     111230345 (rbx1)
   Cul7 complex
     111230345 (rbx1)
   Cul8 complex
     111230345 (rbx1)
   Cul9 complex
     111230345 (rbx1)
DNA repair and recombination proteins [BR:sdu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      111230345 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      111230345 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 111230345
NCBI-ProteinID: XP_022612761
UniProt: A0A3B4T222
LinkDB
Position
Unknown
AA seq 108 aa
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcagcagctatggatgtagatacaccgagcggcacaaacagcggagcaagcaagaag
cgatttgaagtaaagaagtggaatgctgtggcgctgtgggcctgggacattgtggtggat
aactgtgctatctgtcgaaaccacatcatggatctctgtatagagtgccaggccaaccaa
gcttctgcaacttctgaggagtgcactgtagcctggggtgtctgcaatcatgccttccat
ttccactgtatttctcgctggctgaaaacgagacaggtgtgtcctctggacaacagggag
tgggagtttcagaaatatggacactag

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