Seriola dumerili (greater amberjack): 111230345
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Entry
111230345 CDS
T05606
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03420
Nucleotide excision repair
sdu04110
Cell cycle
sdu04114
Oocyte meiosis
sdu04120
Ubiquitin mediated proteolysis
sdu04141
Protein processing in endoplasmic reticulum
sdu04310
Wnt signaling pathway
sdu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111230345 (rbx1)
04120 Ubiquitin mediated proteolysis
111230345 (rbx1)
09124 Replication and repair
03420 Nucleotide excision repair
111230345 (rbx1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111230345 (rbx1)
04350 TGF-beta signaling pathway
111230345 (rbx1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111230345 (rbx1)
04114 Oocyte meiosis
111230345 (rbx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111230345 (rbx1)
03400 DNA repair and recombination proteins [BR:
sdu03400
]
111230345 (rbx1)
Enzymes [BR:
sdu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
111230345 (rbx1)
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
111230345 (rbx1)
Multi subunit type E3
SCF complex
Ring finger protein
111230345 (rbx1)
Cul2 complex
111230345 (rbx1)
Cul3 complex
111230345 (rbx1)
Cul4 complex
111230345 (rbx1)
Cul7 complex
111230345 (rbx1)
Cul8 complex
111230345 (rbx1)
Cul9 complex
111230345 (rbx1)
DNA repair and recombination proteins [BR:
sdu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
111230345 (rbx1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
111230345 (rbx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
111230345
NCBI-ProteinID:
XP_022612761
UniProt:
A0A3B4T222
LinkDB
All DBs
Position
Unknown
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagctatggatgtagatacaccgagcggcacaaacagcggagcaagcaagaag
cgatttgaagtaaagaagtggaatgctgtggcgctgtgggcctgggacattgtggtggat
aactgtgctatctgtcgaaaccacatcatggatctctgtatagagtgccaggccaaccaa
gcttctgcaacttctgaggagtgcactgtagcctggggtgtctgcaatcatgccttccat
ttccactgtatttctcgctggctgaaaacgagacaggtgtgtcctctggacaacagggag
tgggagtttcagaaatatggacactag
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