Seriola dumerili (greater amberjack): 111231099
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Entry
111231099 CDS
T05606
Symbol
sharpin
Name
(RefSeq) sharpin isoform X1
KO
K20894
shank-associated RH domain-interacting protein
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04217
Necroptosis
sdu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
111231099 (sharpin)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
111231099 (sharpin)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdu04121
]
111231099 (sharpin)
Ubiquitin system [BR:
sdu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
111231099 (sharpin)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
CATSPERB_Ig-like
Motif
Other DBs
NCBI-GeneID:
111231099
NCBI-ProteinID:
XP_022613811
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All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MALSSGGWAPPAPVPASSQQAACGGPAPTACCSTVLMSVRVSVCHSGIRPLCLPGAGSET
LRLQLSMDPSRAGEFRLALRDTSGNRSVFIAEFDLRSVQYEVKSPRCHEMRLAAPPHDCI
RFNFRCDREAEEWATVVMSSLREAHRVANINTYESDGRQNHTAAMEQWSSASLPLTEELC
LELTRAIEAGDTQAASQHASALARQKAALTIQLSEKNYADGEISLSVVVEDVSSSCCVTV
KVFPYMTVAALKQQVFLEYGFHPRVQRWVIGQCLCTEPRSLASYGVQKDGDTAYLYLISA
RQARITRQLFQQDLESALLAPPLPPGNGPTSQDWRGYSTLPSRLPHNNQGSTGGGSDRSG
DIKDVLDIENLQLNDHTTKASKTQQTEWDCPSCTFINKPSRPGCEICATARPDTHIQQEK
GRREDRGESGLSSS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcactcagctcgggtggctgggctcctccagccccggtccctgcctcgtcccagcag
gctgcatgcggcggccctgcgccgacggcttgctgcagtactgttttgatgtcagtccgg
gtgtcggtgtgccattccgggatccggcccctgtgcctccccggagcaggcagcgagact
ctgcgcctacaactcagcatggacccgagccgggccggagagttcagacttgcactgcga
gatacgagcggaaaccgtagtgtgttcattgcagagtttgaccttcgctcggtgcagtat
gaggtcaagtcccctcgctgccatgagatgcgtcttgctgcgccgccccacgactgcatc
cgcttcaacttccgctgcgaccgagaggccgaggagtgggccacagtggtgatgtcgtcg
ctaagagaggcacatcgagttgcaaatattaacacgtacgaatcagatggcagacagaac
cacacggcagctatggagcagtggagctcagcctcgctgccgctcaccgaggagctgtgt
ttggagcttaccagggcgattgaagcgggtgacactcaagcagcttcccaacacgcgtcg
gctctggctcgccaaaaagcagcgctgaccattcaactctctgaaaagaactacgcagac
ggagagattagtttatctgtggtagtggaggatgtctcgtcatcctgctgcgtcacagtg
aaagtgtttccctacatgactgtggctgcactcaagcaacaggtgtttctcgagtacggt
ttccatcctcgcgtgcagcgctgggtgatcggtcagtgtttgtgcactgagccgaggtca
ttagcgtcctacggggtgcagaaggacggtgacacagcatacctttacctgatctctgcc
cgacaggcccgtattacccgccagctgttccagcaggacctggagagcgccctcctcgcc
ccacctctccccccaggcaatggacccacctcccaagattggaggggttacagcacccta
ccctcaaggctaccccacaacaaccaggggagcacaggtggaggaagcgatagatcaggt
gatattaaagatgttcttgacatagagaatctgcaactgaatgatcacaccaccaaagcc
agtaaaacacagcagacagagtgggattgtccctcgtgcactttcatcaacaaaccgtct
cgtccgggctgcgaaatctgcgctacagccagacccgacacacacatccagcaggagaaa
ggaaggagagaggaccggggagagtctggtttaagcagcagctga
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