Seriola dumerili (greater amberjack): 111231510
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Entry
111231510 CDS
T05606
Name
(RefSeq) low-density lipoprotein receptor-like
KO
K12473
low-density lipoprotein receptor
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03272
Virion - Hepatitis viruses
sdu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
111231510
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111231510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111231510
Membrane trafficking [BR:
sdu04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
111231510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
TMEM154
hEGF
DUF1180
Motif
Other DBs
NCBI-GeneID:
111231510
NCBI-ProteinID:
XP_022614346
LinkDB
All DBs
Position
Unknown
AA seq
881 aa
AA seq
DB search
MFGTWRGLAGLSTCCCVLMLIHCLPQADAASTCSSTQFKCGNGRCITRRWICDGTDDCGD
GTDELPATCATKTCLESEFSCGPPMNQCIPGSWHCDGKAECDNGADEKNCTAKECKAGEF
RCANGQCISKTFICDNDNDCSDGSDEVSCPKPKCSARSFQCNNSVCVPAMWRCDGDKDCA
DGSDEWPQTCAGEQPGKTAAPCLRHEFQCANGECIHSSWQCDEGVDCGDGSDEVNCSRPS
CRPDEFQCNDGSCIHGSLQCDNKADCRDLSDEIGCHIENLCEGPTKFKCGSGECISMAKV
CDTQRDCRDSSDEPVKECGNNECLTENGGCSHDCNDLKLGYNCSCPAGYTLKMDKRTCED
IDECAEPDTCSQICINLPGTYKCDCKNGYEIDPATKTCKAESGTVPTLYFTNRHEVRKMT
MDRTEYVSVIPQLKSALALDMDMPNKMIFWSDLSLKKIFSCTIDMASNSSHHTVVIGSGI
ESAEGIAVDWIHGNIYWTDRILKTISVAATDGSKRKTLFTENLEKPRAIVVDPVNNFMYW
TDWGEQAKIEKSGLNGADRVALVTDNILWPNGITLDMVNQRLYWVDSKMHMLSSIDVNGG
MRHSLIFSEEKLFHPISLTVFEEKVFWTDIHNGAVFSANRLTGKDIIELARDLDQPQDII
LYHNLKQPNGTNWCRESNSMNGGCEFLCLPAPWINQHSPKYTCACPDNMTMGPDMRKCVT
ASTAPPPAAENKTGTPLLPKTSTKPTTPRQPAPTTTTTTTTTTTTATEKLTSTSSTQHTQ
STQLPAATGQGNRLAAVPAEAPSSHPIALYVVLPIMVISLLVFGAVLLWRHWRLKNTNTI
HFDNPVYQKTTEDELHICRNSSDGYVYPQRQMLSMEDMDVA
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggacgtggaggggacttgccggactgtccacatgttgttgtgtgctgatgctg
attcattgtttgcctcaagcagatgcagcatctacatgcagctccacccagtttaagtgt
ggaaatgggagatgtatcacccgcaggtggatttgtgatggaacggacgattgtggtgat
ggaaccgatgagctgcctgcaacctgcgcgaccaaaacctgtctggagtcagaattcagc
tgtggcccccccatgaaccagtgtattccgggaagctggcattgtgacggcaaagctgag
tgcgacaacggggctgatgagaagaactgcacggccaaagagtgcaaagctggagagttt
cgttgtgccaatggccagtgtatatccaagaccttcatctgcgacaatgacaacgactgc
tcggatggctcagatgaggtttcctgccccaaacccaaatgcagtgctcggtccttccag
tgcaacaactcagtgtgtgtgccagccatgtggcgctgcgatggagacaaggactgtgcc
gacgggtctgacgagtggccgcagacctgtgccggagagcagccaggcaagacggcggcg
ccctgcttgcgccacgagtttcagtgtgcaaatggggagtgtatccacagtagctggcag
tgtgatgaaggcgtggactgtggggatggatcggacgaggtcaactgcagtcgtcctagt
tgtcgtccagatgagttccagtgtaatgacggctcctgtatccatggcagcctccagtgt
gacaataaggccgactgcagagacctcagtgatgagattggctgccacatagaaaattta
tgtgaaggcccaaccaagttcaaatgtggcagcggggagtgtatcagcatggcgaaggtg
tgtgacacacagagagactgcagggactcatcagatgaacctgtcaaagagtgtggcaat
aatgaatgtttgaccgaaaatggcggctgctcccatgactgcaatgatctgaagcttggc
tacaactgctcatgccctgctggctataccctgaagatggacaagagaacatgtgaagat
attgatgaatgtgccgaaccggacacttgcagtcagatctgcatcaacctgccgggcacc
tacaaatgtgactgcaagaatggctatgagatcgaccctgcaaccaagacttgcaaggct
gaatcaggcaccgtacccaccctgtacttcaccaacagacacgaggtgaggaagatgacg
atggaccgcaccgagtatgtcagtgtgatcccacagctgaaaagtgcgttggctctggac
atggatatgccaaacaagatgatcttctggtctgacctgtctctaaagaaaatcttcagc
tgcacgatcgacatggccagtaactcctctcaccacactgtagtaattggcagtgggatt
gagtccgcagagggtattgctgtggactggatccatggtaacatctactggactgacagg
attttgaagactatctctgtggcagcaacagacggcagcaagaggaagaccctcttcaca
gaaaacctggagaagccaagagccatcgttgtggacccagtaaataactttatgtactgg
acagactggggtgagcaggctaagatagagaagagtgggctgaatggagcggatcgtgtt
gccttggtgacagacaacattttgtggcccaatggcatcaccctagacatggtcaaccag
cgtctgtactgggtggactccaagatgcacatgctctctagcatcgatgtgaatggaggg
atgcgacacagtctcattttcagcgaggagaagctcttccaccccatctctctgactgtc
tttgaggagaaagtgttttggacagacatccacaatggcgctgtttttagtgccaaccgc
ttgacgggaaaggacatcatcgagctggcaagggacctggaccagccacaggacatcata
ctgtaccacaacctcaaacagccaaacggtaccaactggtgcagagagagtaacagtatg
aatggaggttgtgagtttctttgcctccctgccccttggatcaaccagcactctcctaaa
tacacctgtgcctgtcctgacaacatgaccatgggacctgacatgaggaaatgtgtgaca
gcaagcacagctccccctccagctgcagaaaacaaaacgggtacaccactcctgcctaaa
acttccaccaagcctactacacccaggcagcctgcccctaccacaacaactacaactaca
accaccaccaccacagctactgaaaaactgacatctacctcatccacccagcacacacag
agcacacagctgcctgctgccactggtcaaggtaacagattggcagcagtgcctgcagaa
gccccttcatcccaccctattgctctctatgttgtgttgccaataatggtcatctccctg
ctggtgtttggagcagtgttgctatggagacactggcgtctgaagaacaccaacaccatc
cactttgacaatccagtgtaccagaaaaccacagaggacgagttacacatctgcaggaac
agctctgacggctatgtttatcctcagaggcaaatgctgagcatggaggacatggatgtt
gcatga
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