Seriola dumerili (greater amberjack): 111232399
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Entry
111232399 CDS
T05606
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111232399
Cell adhesion molecules [BR:
sdu04515
]
Cadherins
Protocadherins
111232399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
111232399
NCBI-ProteinID:
XP_022615622
LinkDB
All DBs
Position
Unknown
AA seq
829 aa
AA seq
DB search
MCYNGPRMTKKIGYRDWRWQALWWHHFFLLWTTIDGQIRYSIPEELKQGSVVGNLAKDLG
LGLSDIFDRKLRVASEAGEQYFSVDAGKGELVVNDRIDREALCGQSASCVLPLQVVAENP
LQSHRIEIEIRDINDNSPHFLTQEINLKIPESVALGKRFPLESAEDPDVGSNSLKTYSLS
KNDYFSLKFKDTKNGKAVPELVLEKPLDREKNALHQLLLTALDGGNPVTSGTCKITITVL
DINDNFPVFDENEYKVSLKENSTKGTFVIKLTAADADDGLNGEVKYAFGSRTPDFVLSTF
EINDMTGEIVLKGILDYESYRSYLIDITAKDKGVPEMEGHCRVQLDVEDINDNAPEIVLT
SKPSPVREDAPSDTVVALISARDLDSANNGKVKLQLPKHSPFTLKPSFSNNYELVTSGPL
DRESFAEYNVEITATDSGSPPLSSKKTIPVSITDVNDNPPVFTQPSYNVYLKENGVPGSI
LCSVSASDLDFGENAKISYSILDSKVQDVSASSYVYINSDNGSIYSMHSFDYEKLKVFQI
QVQAKDQGSPSLSSNATVHVFILDQNDNAPVVIYPSSAALGSLSHQRMPRSAKAGHLVTK
VTAVDADSGHNAWISYKLAEATDASLFTVNLYTGEVRTKRAVSEQDDTSQRLLIEIRDDG
EPVQSSTATVSIMLEDGLHEPILDLRQKAAEPSKKTGRITLYLILSLASVSVLSLLTFLI
LAVKCVRSSRSSGSCCMRRTDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFR
SCMSPMSEYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSRQ
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtgctataacggaccaaggatgacaaagaaaataggataccgagactggagatggcag
gctctttggtggcatcatttctttctcttgtggactacaatagacggacagattcgttac
agcatcccggaggaactaaaacagggctctgtggtaggaaatctagccaaagatctgggt
ttaggattatctgacatttttgatcgtaaactgcgagtcgcctctgaggctggtgagcag
tatttcagtgtggatgcggggaagggcgagctggtggtgaatgacagaatagacagagag
gctttatgtggacaaagcgccagctgtgttctacctctccaagtagttgctgaaaatcct
ttgcagtctcatcgaattgaaatagaaataagagacataaatgacaattcaccacatttt
cttacacaggagataaaccttaaaataccagaatcagttgcgcttggcaaacgctttcct
ttggagagcgcagaggacccagatgttggaagcaattctttgaaaacctactctctaagc
aaaaacgattatttttctctcaaatttaaagacacaaaaaacggaaaagccgtcccagaa
ttagtgttagaaaagccattagaccgagaaaagaatgctcttcatcagctgctgttaaca
gcattagatggaggaaacccagtcacctcgggaacgtgtaagatcactatcactgtactt
gatataaacgacaattttccagtgttcgatgaaaatgaatacaaagtctctttaaaggag
aacagcaccaaaggaacatttgttattaaacttacagctgcagatgctgacgatggtctt
aatggtgaagttaaatatgcttttgggtcccgcactccagactttgtgttatcaacattt
gaaatcaacgacatgacaggtgaaattgtattaaaaggaatattagattatgaaagctat
agatcatatcttatcgatataactgctaaagataaaggcgtccccgaaatggagggtcac
tgtcgtgtacagctggacgtagaggacataaacgataacgctccagaaattgtgctcact
tcaaaacccagtccagtacgcgaggacgcgccaagtgacacagttgtggctttaatcagt
gcacgagacctcgattccgctaataacggtaaagtgaaactacagctgcccaaacattct
cctttcactcttaaaccatcattttctaataattatgaactggttaccagtggtccttta
gacagagagagtttcgcagagtataatgtcgagataactgccactgattcaggctctcct
cctctgtccagtaaaaaaactataccagtcagcatcactgatgtgaatgacaaccctcct
gtattcactcagccctcctacaatgtatatttaaaagagaatggggtaccaggatctata
ctgtgctcagtatcagcctctgacctggattttggtgaaaatgctaaaatctcttactct
atactggactctaaagtgcaggacgtttctgcctcgtcgtatgtttacattaactcagat
aacggcagcatctacagcatgcactcgtttgactatgagaaactgaaggtgtttcagatt
caggttcaggcaaaggatcagggctctccgtctctcagcagcaacgccactgtccatgtt
tttatcctggaccagaacgacaacgcccccgttgttatttacccctcctccgctgccctg
ggctccctctctcatcagaggatgccccgctccgctaaagcgggtcacctggttactaag
gtgacggccgtggacgctgactcgggccataacgcctggatctcctacaaactggcggag
gccacagacgcctctctgttcactgtcaatctgtacacaggggaggtgaggactaaacgc
gctgtgtccgagcaggacgacacctctcagaggctgcttatagagatcagggacgacggg
gaaccggtccagtcctccactgccacggtgtccatcatgctggaggacggtctccatgag
cccatcttagacctccgacagaaagcggccgagcccagcaagaaaactgggagaatcacc
ctttatttgattctgtctctggcctcggtgtccgtgctgtctctgttgacttttctcatc
ttagcggttaaatgcgtcaggagcagcagaagcagcggtagctgctgcatgagacggacc
gactgtgatgattacaagaaccccaatagaaacctgcagattcagctcaacactgatgga
cctataaagtacgtggaggtcctgggaggagacatgttgtctcagagtcagtccttcagg
tcctgcatgtctccaatgtcagagtacagtgatttcactctgattaagcccagcagcacc
actgactttaaggaggtgatcagtgtcctggatgcgtctttacctgacagcacctggacc
tttgagagccagcaggtgagcagacagtaa
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