Seriola dumerili (greater amberjack): 111232400
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Entry
111232400 CDS
T05606
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111232400
Cell adhesion molecules [BR:
sdu04515
]
Cadherins
Protocadherins
111232400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
111232400
NCBI-ProteinID:
XP_022615623
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MTKRMGYRDLRWQALWWHHFFLLWTSIDGQTRYSIPEELKQGSVVGNLAKDLGLGLSDMF
DRKLRVASEAGEQYFSVDAGKGELVVNDRIDREALCGQSASCVLPLQIVLENPLNLHRIE
VEIKDINDNSPRFHTKEMSLKIAESAAVGARFLLESAEDPDVGSNSLKSYTLNKNDCFTL
KMKEVEDGKTVPELVLEKPLDREKKAVHQLLLTALDGGNPVMSGTSQITITVLDNNDNFP
VFDKNIYKVSLQENTAKDTFVVKMTATDADEGPNGEVEFSFGLRTPDSVSSVFEVNSVTG
EIYLTGDLDYERATSYKIEITAKDKGVPEMESHCRLQIDVVDVNDNTPDIVLTSEPQPVR
EDAPSGTVVALLNARDADSGNNSKVTLQLPKGSPFTLKPSFSNNYALITNGPLDRESFSE
YNIEITATDSGSPPLSSKKTIPVSITDVNDNPPVFTQPSYNVYLKENGVPGSILYSVSAS
DLDFGENAKISYSILDSKVQDVSASSYVYINSDNGSIYSMHSFDYEKLKVFQIQVQAKDQ
GSPSLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVTAVDAD
SGHNAWISYKLAEATDASLFTVNLYTGEVRTKRAVSEQDDSSQRLLIEIRDDGEPVQSST
VTVSILLEDGLHEPILDLRQKAAEPSKKTGRITLYLILSLASVSVLSLLTFLILAVKCIR
SSRSSGSCCMRRSDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCMSPMS
EYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSRKQ
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaatgggataccgagacttgagatggcaggcgctttggtggcatcatttc
tttctcttgtggacttcaatagacggacagactcgttacagcatcccggaggaactaaaa
cagggctctgtggtaggaaatctagccaaagatctgggtttgggactttcagatatgttt
gatcgtaaactgcgagtcgcctctgaggctggtgagcagtatttcagtgtggatgcgggg
aagggcgagctggtggtgaatgacagaatagacagagaggcgttatgtggacaaagtgcc
agctgtgtgttgcctttgcagatcgttcttgaaaacccgctaaatttgcatcgtattgag
gtagaaataaaagatataaatgataattcacccagatttcacacaaaagaaatgtctttg
aaaattgccgaatcggcagcagtgggggctcgttttcttttggagagtgcagaggatcca
gatgttggaagtaattcgttgaaatcatacaccttgaataaaaacgactgttttacgttg
aaaatgaaggaggttgaggatggcaaaacagtccccgagttagtgttagagaagcctctt
gatagagagaagaaagcagttcatcagctgctactgaccgcattagacggggggaaccca
gtcatgtctggtacctcacagatcacaatcacagtgcttgataacaacgacaatttccca
gtatttgataaaaatatatataaagtgtccttacaagagaatactgcaaaggatactttt
gttgtcaaaatgacagcaactgatgctgacgagggaccaaacggagaagttgaattttct
tttggcttgcggacaccggattccgtctcatcggtgtttgaggtaaattctgtaacaggc
gaaatatatttgacaggagacttagattatgaaagagccacatcttacaaaattgaaata
actgcgaaagacaagggggttcctgaaatggagagtcactgtcgtctacagattgatgtt
gtagatgttaatgataacactccagatattgttctcacttctgaaccgcagccagtgcgc
gaggatgcaccaagtggcacagtggtggctctgctcaacgcacgtgacgctgactccggt
aataatagcaaagtgacattgcaactacccaaagggtctccctttactctaaagccatct
ttttcgaataattacgcactaattacaaatggtcctttagacagagagagtttctcagag
tataacattgagataactgccactgattcaggctctcctcctctgtccagtaagaaaact
ataccagtcagcatcactgatgtgaatgacaaccctcctgtattcactcagccctcctat
aatgtatatttaaaagagaatggggtaccaggatctatactgtactcagtatcagcctct
gacctggattttggtgaaaatgctaaaatctcttactctatactggactctaaagtgcag
gacgtttctgcctcgtcgtatgtttacattaactcagataacggcagcatctacagcatg
cactcgtttgactatgagaaactgaaggtgtttcagattcaggttcaggcaaaggatcag
ggctctccgtctctcagcagtaacgccactgtccatgtttttatcctggaccagaacgac
aacgcccccgctgttatttacccctcctccgctgccctgggctccctctctcatcagagg
atgccccgctccgctaaagcgggtcacctggttactaaggtgacggccgtggacgctgac
tcgggccataacgcctggatctcctacaaactggcggaggccacagacgcctctctgttc
actgtcaatctgtacacaggggaggtgaggactaaacgcgctgtgtccgagcaggacgac
tcctctcagaggctgcttatagagatcagggacgacggggaaccggtccagtcctccacc
gtcacggtgtccatcctgctggaggacggtctccatgagcccatcttagacctccgacag
aaagcggccgagcccagcaagaaaactgggagaatcaccctttatttgattctgtctctg
gcctcggtgtccgtgctgtctctgttgacttttctcatcttagcggttaaatgcatcagg
agcagcagaagcagcggtagctgctgcatgagacggtccgactgtgatgattacaagaac
cccaacagaaacctgcagattcagctcaacactgatggacctataaagtacgtggaggtc
ctgggaggagacatgttgtctcagagtcagtccttcaggtcctgcatgtctccaatgtca
gagtacagtgatttcactctgattaagcccagcagcaccactgactttaaggaggtgatc
agtgtcctggatgcgtctttacccgacagcacctggacctttgagagccagcaggtgagc
agaaaacaatag
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