Seriola dumerili (greater amberjack): 111232548
Help
Entry
111232548 CDS
T05606
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111232548
Cell adhesion molecules [BR:
sdu04515
]
Cadherins
Protocadherins
111232548
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
111232548
NCBI-ProteinID:
XP_022615843
LinkDB
All DBs
Position
Unknown
AA seq
828 aa
AA seq
DB search
MQSMRYWRWQALWWHHFFLLWTSIDGQTRYSIPEELKQGSVVGNLAKDLGLGLSEIFDRK
LRVASEAGEQYFSVDAGKGELVVNDRIDREALCGQSASCVLPLQVVIEDPLQLFRVEVEI
QDINDNSPRFPSNDITLEIAESTVVGVRFPLESAIDPDVGSNSLKSYTLSKDECFNIRVK
EVAGGRKVPELILAKVLDREKKAVHKLLLTAVDGGNPVRSGTSQVSIKVLDINDNVPAFE
KNLYKVSINENTEEGAMIVQTKATDMDDGQNGEIEYSFGAHTSDAVLSVFNIDQLSGTIF
LKGKLDFESTSNYEIDISAKDKGIPRMEGHCTVHVDVLDVNDNAPEIILTSHPKPVREDS
PNGTVVALLSARDLDSGDNGKVILQLPKKSQFALKPSFSQNYALVTRGILDRENVSEYYI
EITATDSGSPPLSSKKTIPVSITDVNDNPPVFTQPSYNVYLKENGVPGSILYSVSASDLD
FGENAKISYSILDSKVQDVSASSYVYINSDNGSIYSMQSFDYEKLKVFQIQVQAKDQGSP
SLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVTAVDADSGH
NAWISYKLAEATDASLFTVNLYTGEVRTKRAVSEQDDSSQRLLIEIRDDGEPVQSSTVTV
SIMLEDGLHEPILDLRQKVAEPNKKTGRITLYLILSLASVSVLSLLTFLILAVKCIRSSR
SNGSCCMRRTDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCMSPMSEYS
DFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSRKQPFILSKKI
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctatgcgctactggagatggcaggcgctttggtggcatcatttctttctcttg
tggacttcaatagacggacagactcgttacagcatcccagaggaactaaaacagggctct
gtggtaggaaatctagccaaagatctgggtttgggactatctgagatttttgaccgtaaa
ctgcgtgtcgcctctgaggctggtgagcagtatttcagtgtggatgcggggaagggcgag
ctggtagtgaatgacagaatagacagagaggctttatgtggacaaagcgccagctgtgtg
ttgcctctgcaggttgtaattgaagatccattacaactttttcgtgttgaagttgaaata
caagacattaatgataattcacccagattcccatcaaatgatatcacattggagattgca
gaatcgacagttgtaggtgttcgattccctttagaaagcgccatagacccagatgtgggc
agtaattcactgaagtcatacactctcagtaaagacgaatgttttaatattagagttaaa
gaagttgctggtggaaggaaagtccctgagttgattttagcaaaagttttagatagagag
aagaaggctgttcataagcttttgttgaccgctgtagatggaggcaacccagtgagatca
ggaacctctcaagtatctatcaaagtccttgacatcaacgacaacgttccagcttttgag
aaaaacttgtataaagtatcaattaatgaaaatactgaagaaggtgcgatgattgtacaa
acaaaagcaacagatatggacgatggtcaaaacggagaaatagagtactcatttggagcg
cacacatcagatgctgttctctctgtttttaatattgatcagttatcgggaactatattt
cttaaaggaaaactagattttgaatcaacttcaaattatgaaatagacataagtgcgaaa
gacaaaggcattccgagaatggaggggcactgtactgtgcatgttgacgttttagatgtt
aacgataatgccccagaaataatactcacgtctcatccaaagccagtgcgcgaagactcc
cctaatggcaccgtggtagctttactcagtgcccgagacctagactccggtgataacggt
aaagttatattacagctccctaagaaatcacaatttgccctgaaaccatcgttctcacaa
aattacgcgctggttaccagaggcattttagatagagaaaatgtttccgaatattatatt
gaaataacagccactgattcaggctctcctcctctttccagtaagaaaactataccagtc
agcatcactgatgtgaatgacaaccctcctgtattcactcagccctcctataatgtatat
ttaaaagagaatggggtaccaggatctatactgtattcagtatcagcctctgacctggat
tttggtgaaaatgctaaaatctcttactctatactggactctaaagtgcaggacgtttct
gcctcgtcgtatgtttacattaactcagataacggcagcatctacagcatgcagtcgttt
gactatgagaaactgaaggtgtttcagattcaggttcaggcaaaggatcagggctctccg
tctctcagcagcaacgccactgtccatgtttttatcctggaccagaacgacaacgccccc
gctgttatttacccctcctccgctgccctgggctccctctctcatcagaggatgccccgc
tccgctaaagcgggtcacctggttactaaggtgacggccgtggacgctgactcgggccat
aacgcctggatctcctacaaactggcggaggccacagacgcctctctgttcactgtcaat
ctgtacacaggggaggtgaggactaaacgcgctgtgtccgagcaggacgactcctctcag
aggctgcttatagagatcagggacgacggggaaccggtccagtcctccactgtcacggtg
tccatcatgctggaggatggtctccatgagcccatcttagacctccgacagaaagtggcc
gagcccaacaagaaaactgggagaatcaccctttatttgattctgtctctggcctcggtg
tccgtgctgtctctgttgacttttctcatcttagcggttaaatgcatcaggagcagcaga
agcaacggtagctgctgcatgagacggaccgactgtgatgattacaagaaccccaataga
aacctgcagattcagctcaacactgatggacctataaagtacgtggaggtcctgggagga
gacatgttgtctcagagtcagtccttcaggtcctgcatgtctccaatgtcagagtacagt
gatttcactctgattaagcccagcagcaccactgactttaaggaggtgatcagtgtcctg
gatgcgtctttacccgacagcacctggacctttgagagccagcaggtgagcagaaaacag
ccatttatcttatcgaagaaaatataa
DBGET
integrated database retrieval system
