Seriola dumerili (greater amberjack): 111232550
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Entry
111232550 CDS
T05606
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sdu04515
]
111232550
Cell adhesion molecules [BR:
sdu04515
]
Cadherins
Protocadherins
111232550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
111232550
NCBI-ProteinID:
XP_022615845
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MTKRMGYRDWRWQALWWHHFFLLWTTIDGQTRYSIPEELKQGSVVGNLAKDLGLGLSDIF
ERKLRVDSEAGEQYFSVDAGKGELVVNDRIDREALCGQSASCVLPLQVVTENPLQLHRIE
VEIRDINDNSPIFSTEERSLKIAESTATGIRFPLETAQDLDVGSNSVKSYTLSKDECFSL
RIKELPGNRKVPELVLEKSLDREKQSVHQLLLTALDGGNPVKTGTTKIIVTVLDNNDNVP
VFKRPLYNVTVHENTVAGSVLVKVEATDADEGVNGEIEYVFSDHTPQSLLSIFLLHSDTG
EISIVGPLDYEINTIHEIDITAKDKGVPEMEGHCRVQVVVIDINDNAPEIVLTSKPNPVR
EDSRRGTVVALIRARDLDSGDNGKVTLKLQNGSPFILKPSFSNNYALVTNGPLDRESFSE
YNIEITATDSGSPPLSSKKTINVIITDVNDNPPVFTQPSYNVYLKENGVPGSILYSVSAS
DLDFGENAKISYSIMDSKVQDVSASSYVYINSDNGSIYSMHSFDYEKLKVFQIQVQAKDQ
GSPSLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVTAVDAD
SGHNAWISYKLAEATDASLFTVNLYTGEVRTKRAVSEQDDSSQRLLIEIRDDGEPVQSST
VTVSIMLEDGLHEPILDLRQKAAEPSKKTGRITLYLILSLASVSVLSLLTFLILAVKCIR
SSRSSGSCCMRRTDCDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCMSPMS
EYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSRKQPFILSKKI
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaatgggataccgagactggagatggcaggcgctttggtggcatcatttc
tttctcttgtggactacaatagacggacagactcgttacagcatcccagaggaactgaaa
cagggctctgtggtaggaaatctagccaaagatctgggtttgggattatctgacattttt
gaacgtaaattgcgtgttgactctgaggctggtgagcagtatttcagtgtggatgcgggg
aagggcgagctggtggtgaatgacagaatagacagagaggctttatgcggacaaagcgcc
agctgtgtgttgcctttacaggttgtaacagagaacccgctacaactacaccggatagaa
gtagaaataagggacataaatgacaattctccgattttttcaacagaggagcgatcttta
aagattgcagaatccactgccacaggcatacgcttccctttggaaacagcccaggatctg
gacgttggtagtaattcggttaaatcttatactctgagtaaagatgagtgttttagttta
aggattaaagagttgccaggtaatcgaaaggttccggaactagtactagagaaatcactt
gacagagagaaacaaagcgtacaccagttactactgacggctttagacggaggcaatcct
gtcaaaactggaaccacaaaaatcatcgttactgtacttgacaataacgacaatgtccct
gttttcaaaaggccgttatataatgtaactgtgcatgaaaatactgtcgctggttctgta
cttgtaaaagttgaagcaacagacgcagatgagggtgttaatggagagattgaatatgta
ttttctgatcacacaccgcagtcattgttgtccatttttcttttacattcggatacaggt
gagatctccattgttgggccgttagattatgaaatcaatacaatacatgaaatagatata
actgcgaaggataaaggagttcctgagatggaggggcactgtcgtgtgcaagtagtagta
attgacattaatgacaatgccccagaaatagttctcacttcaaaaccaaatccggtacgg
gaggactcacggagaggcacggtagttgctttaatcagagcacgagaccttgactccggt
gataacggaaaagtgacgttaaaactccaaaacgggtcacccttcattttgaaaccatct
ttttctaataattacgcactagttacaaatggtcctttagacagagagagtttctcagag
tataacattgagataactgccactgattcaggctctcctcctctgtccagtaagaaaact
attaatgtcattattactgatgtgaatgacaaccctcctgtattcactcagccctcctat
aatgtatatttaaaagagaatggggtaccaggatctatactgtattcagtatcagcgtct
gacctggattttggtgaaaatgctaaaatctcttactctataatggactctaaagtgcag
gacgtttctgcctcgtcgtatgtttacattaactcagataacggcagcatctacagcatg
cactcgtttgactatgagaaactgaaggtgtttcagattcaggttcaggcaaaggatcag
ggctctccgtctctcagcagcaacgccactgtccatgtttttatcctggaccagaacgac
aacgcccccgctgttatttacccctcctccgctgccctgggctccctctctcatcagagg
atgccccgctccgctaaagcgggtcacctggttactaaggtgacggccgtggacgctgac
tcgggccataacgcctggatctcctacaaactggcggaggccacagacgcctctctgttc
actgtcaatctgtacacaggggaggtgaggactaaacgcgctgtgtccgagcaggacgac
tcctctcagaggctgcttatagagatcagggacgacggggaaccggtccagtcctccacc
gtcacggtgtccatcatgctggaggacggtctccatgagcccatcttagacctccgacag
aaagcggccgagcccagcaagaaaactgggagaatcaccctttatttgattctgtctctg
gcctcggtgtccgtgctgtctctgttgacttttctcatcttagcggttaaatgcatcagg
agcagcagaagcagcggtagctgctgcatgagacggaccgactgtgatgattacaagaac
cccaacagaaacctgcagattcagctcaacactgatggacctataaagtacgtggaggtc
ctgggaggagacatgttgtctcagagtcagtccttcaggtcctgcatgtctccaatgtca
gagtacagtgatttcactctgattaagcccagcagcaccactgactttaaggaggtgatc
agtgtcctggatgcgtctttacccgacagcacctggacctttgagagccagcaggtgagc
agaaaacaaccatttatcttatcgaagaaaatataa
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