Seriola dumerili (greater amberjack): 111233323
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Entry
111233323 CDS
T05606
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdu01009
]
111233323
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111233323
Protein phosphatases and associated proteins [BR:
sdu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111233323
Ion channels [BR:
sdu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111233323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_5
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
111233323
NCBI-ProteinID:
XP_022616829
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MNPMTQLYYKKATYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEV
YYNMDVNCLDPLGRSALLIAIENENLEIMELLLDHGIHTGDALLYAIRKEVVGAVELLLS
HRRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELDPRQCHDLAKLKLAIKY
HQKEFVAQPNCQQLLATLWYDGFPGWRRRHWVVKLVTCFIIGLLFPVFSLIYLLAPKSAL
GRFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTIVEWMILPWVLGFIW
AEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETTASEEPSNCKGIRCERQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIIPSPKSIWYLLMWLHNKLCRRGQPPGEDTHKCENLREFTERHADSLIQNQHYQ
EVIRSLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRRPPRRHYSSS
SETTREDGAMASEDDSESGDGGGGGGVQRSKSVTFMTPLEDDTGPAPTLGVSALVRSISG
MTQIERGGEGEEGELEEGIGWGEEEEEEEGKPKSNGLKTTVIPPSSTTVLPSPSSSFSSS
FSSSLARTRSRLQRLSSPRAKTDSFKRLSYLFSRSKRKAPPMPLSLQSPPSYTISDGLLR
PLGSHSHSDFGLSDVTRSETHLNEVGRSVDISNPSFSPRRTNGRDSLLTLPLPPPCPCQS
LHCASNMSESSSRLLDSSEDVFQGGGVGGAGEGRVDGGGGRGGVMMMGGWVGPCDDVIED
SCEVIEDSVTTQL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatgacacagttgtactacaagaaggcgacatattcgccgtaccgcgaccgc
atcccgcttcagatcgtccgggctgaggtggagctgtctgcggaggagagggcctatctc
accgccgtggagaaaggtgactatgcaggcgtcaagcacgccctgcgcgaggcggaggtc
tactacaacatggacgtgaactgtctggacccgctgggccgcagcgcgctcctcatcgcc
atcgagaacgagaacctggagatcatggagctccttctcgaccacggcatccacacgggc
gacgccctgctctacgccatcaggaaggaggtggtgggcgccgtcgagctgctgctgtca
cacaggaggcccagcggcgagaaacaggttccttcgctcatgatggacagtcagttttca
gagttcaccccagacataactcccatcatgctcgctgctcacaccaacaactacgagatc
atcaaactgctcgtccagcggaaggtcaccatccccagaccgcaccagatccgatgtgac
tgtgtcgagtgcgtctccagttcggaggttgacagcctgcggcattcacggtcccgactc
aacatctacaaggctctggcctcgccgtctctcattgcgctgtcgagcgaagaccccatc
ctcaccgccttcagactgggctgggaactcaaagagctcagcaaggtggagaacgagttt
cgtcaggagtacgaggagctctcacagcagtgcaaacgcttcgccaaagacctcctggac
caggccaggagttcaagagagctggagaccatcctgaaccacagagacaacgaccagagc
gaggaactggaccccagacagtgccacgacctggccaagctcaaactggccatcaaatac
caccaaaaagagtttgtggcccagccgaactgccagcagctcctggccacactgtggtac
gacggcttcccgggctggaggagacggcactgggtggtcaaactggtcacctgcttcatc
atcggactcctgtttcctgtcttctcactgatctacctgttggcgccaaagagcgctctg
ggacgcttcatcaagaagcccttcatcaagttcatctgtcacacggcgtcctacctgacc
ttcctcttcctgctgctgctggcgtcgcagcacatcgcccggaccaacctccacatgcag
ggacccccgcccaccatcgtggagtggatgattctcccatgggtgctggggttcatctgg
gcagagattaaagagatgtgggacgggggattcacagagtacatccacgactggtggaac
ctgatggacttcgccatgaactccctttacctggccactatatcactgaagatagtggcc
tacgtgaagtataactcctctcgtcccagggaggagtgggagatgtggcacccgacgctg
atcgccgaagctctgttcgccatcgccaacatcttcagctcgctcagactcatctccctc
ttcaccgcaaactcccacctcgggcccctgcagatctcactgggcaggatgctgctggac
atcctcaagtttctcttcatctactgtctggtcctgctggcgttcgccaacggtctgaac
cagctgtatttctactacgagaccacggcgtcggaggagcccagcaactgcaagggcatc
cgctgcgagaggcagaacaacgccttctcaacgttgtttgagaccctccagtctctgttc
tggtcgatattcgggctcttgaacttgtacgtcaccaacgtgaaagcccggcacgagttc
acagagttcgtgggggcgaccatgttcgggacgtacaacgtcatctcgctggtggtgctg
ctcaacatgctgatcgccatgatgaacaactcctaccagctgatcgccgaccacgccgac
atcgagtggaagttcgctcgcaccaagctgtggatgagttacttcgacgagggcggcacg
ctgccgccgccgttcaacatcatcccgagccccaagtccatctggtacctgctcatgtgg
ctgcacaacaagctgtgcaggaggggccagccgcccggggaggacacgcacaaatgtgaa
aacctccgagagttcacggaacgtcacgctgacagtctgatacagaaccagcattaccag
gaagtgatccggagcctggtgaagaggtacgtggcggccatgattcgcagcgccaagacc
gacgagggactgacggaggaaaactttaaggagttgaagcaagacatctccagttttcgc
tacgaggtcctggatctcctcggcaaccggcgtcctccccggcgacactactcttcctcc
agcgagacaacgagagaggatggcgccatggcctcggaggatgacagcgaatcgggcgat
ggcggcggaggaggcggagtccaaaggtcaaagagcgtgaccttcatgaccccgctggag
gacgacacggggccggcgcccacgctcggcgtctccgccctggtgcgctccatttcagga
atgacccagatagaaagagggggagagggggaggagggggagctggaggagggcatcgga
tggggggaagaggaggaggaagaggaggggaaaccaaagagcaacgggctgaagacgacc
gtcatccctccgtcctccaccaccgtcctgccctcgccatcttcatccttctcctcgtcg
ttctcatcgtcactcgctcgcacgaggagtcgcctgcagcgcctctcgtctccgagggcg
aaaacggactctttcaaacgcctctcctacctgttctcccgctccaaacgcaaagccccg
cccatgcctctttccctccagtccccgccctcctacaccatctctgacgggttgctccgc
cccctggggagccacagccactccgacttcggactcagtgacgtgaccagaagcgagact
cacctgaacgaggtgggccgctcagtcgacatcagtaacccctcgttctcgccgcggagg
acgaacgggcgggactcactcctgacgctgcccctcccgcccccgtgcccctgccaatcc
ctgcactgtgcttccaacatgtccgagtccagctctcgcctcctggactccagcgaggac
gttttccagggcggaggcgtgggaggagcgggcgagggccgtgtggacggaggaggggga
agaggaggggtgatgatgatgggcgggtgggtggggccgtgcgacgatgtcatagaggac
agctgtgaggtcatagaggactcagtcaccacgcagctatag
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integrated database retrieval system
