Seriola dumerili (greater amberjack): 111234349
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Entry
111234349 CDS
T05606
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein isoform X1
KO
K06618
retinoblastoma-associated protein
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04110
Cell cycle
sdu04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111234349 (rb1)
04218 Cellular senescence
111234349 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdu01009
]
111234349 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdu03000
]
111234349 (rb1)
Protein phosphatases and associated proteins [BR:
sdu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111234349 (rb1)
Transcription factors [BR:
sdu03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
111234349 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
HTH_CHD6-9
Motif
Other DBs
NCBI-GeneID:
111234349
NCBI-ProteinID:
XP_022618103
UniProt:
A0A3B4UFL3
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MPPKKRNSGTTQSKGLKPSAESASPDKKESPELSLKKHRDKDAEFVTLCKTLHVTDLVCD
RAWTLWKTIQESMDEVADNQKRLWGACLFVTVTDMDVACFTLTQVLKAVSLNVKQFMSLV
RKLDVNLDTISTKVNSALTRLEKKYDVTLALYQRFEKTCKKIFALVADGKERETMRSCWT
MFLLAKGRVLQMDDDLVISFQLLLCTLELFIKRCPPDLLQPLYKSSISKVQSPPTRTSRR
NQSKAKSRPPEPEMDVQLLETLCKENECNAEEVKNVYQTSFSAFLDSLDLSRSPDFPQVN
DLDQQYEEHYLKSRDIDGRLFLDGDETVLVPKVEILQGERTPKKNLQDEDAVLIPPQTPI
RAAMTSIQQLRGDLISSGDQPSTNLDTYFKNCTVDPTQDVLKRLETLEQAFSQRFGQAVG
PRCVILGKQRFTLGVRLYYKVMEEMLKSEEKRLSVQNFSKLLNDSTFHTSLLACALEVVM
ATYGESSFKTGGYNHGGGDQAETDVCFPWILDVFKLSAFDFYKVIESFIKADPTLSKDIV
KHLETCENLIMERIAWRTASPLFELLKQEHEGGAAEQVETPASFSQPLQHNHTAADLYLS
PMRPGHRALPPESPATASSQASSQVLTQPAGQTPRPPKSNSLSLFYKKLYRLAYTRLKIL
CSYLLSSHPELEPIIWTLFQHTLQYEYELMRDRHLDQLMMSAMYAICKVKSVDLRFKTIV
TAYKNMANTNQETFKHVLITEGHYDSIIVFYNQVFMQKLKTNILQYASTRPPTLSPIPQI
PRSPYKFPNSPLRVPGSNNVYISPLKSPRMSPGIMTPRSRMLVSIGESFGLSSRFQKINQ
MVNSSDRSFKRTLDLGSAPKPLKRLRFDVDGQDEADGSKSGGDSTLIQKLAEMSSTRSRM
QEQKMKEDAEARKE
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgccacctaaaaagcgcaactctgggacgacacagagcaaggggctgaagcccagtgct
gaaagtgcctctccagacaagaaggagagtccagagttatctcttaaaaaacacagagac
aaggatgccgagtttgtgaccctgtgcaagacccttcacgtcacagacctggtgtgtgac
cgtgcctggaccctgtggaaaaccattcaagagtccatggatgaagtcgctgacaatcag
aaaaggctgtggggtgcttgtctctttgtgactgtgacagacatggatgttgcctgtttc
actttaactcaggttctgaaagcagtcagtctaaatgtaaagcagtttatgtctctggtg
aggaagttggatgtgaacttggatacaattagcaccaaggtgaattcagcactgacacga
ctggagaagaagtatgatgtgacactggctctgtaccagaggtttgagaagacttgcaag
aagatctttgctttggttgctgatggcaaggagagagagaccatgcggagctgctggaca
atgtttcttttggccaaaggaagggtcttacagatggatgatgacctggtcatatcattc
cagctgctgctttgtacgctggagttattcatcaagcgctgccctccagaccttctgcag
cctctttacaaatcatccatcagtaaagtccagagccccccaacacgaacatctcgtcga
aaccagagcaaagccaaatcccgacctccagagccagagatggatgtgcagcttctcgaa
accttgtgcaaagagaatgaatgcaatgcagaagaggtgaagaatgtataccagaccagt
ttctctgctttcctggactcactggatctttcaagatccccagattttcctcaggtgaat
gacctcgaccaacaatatgaagaacactacctcaaaagtagagacattgatggacggctg
tttttggatggagatgagactgttcttgtgcctaaagtcgaaatattacagggggagaga
acgccaaagaagaacctgcaagatgaagatgctgtactcatccctccacagactccaatc
agagctgccatgacctccattcagcagttgaggggtgatctcatctccagtggggaccag
ccatcaactaacctggatacatatttcaaaaattgcactgtggacccgacgcaggacgtg
ctgaagcgtttggagacacttgaacaggcgttcagccaaagatttggtcaggcagtcggt
ccgcgctgtgtcatacttggcaagcagagatttaccctcggagtcagactgtattacaaa
gtcatggaggaaatgctgaaatcggaagagaagcgactgtctgtgcaaaatttcagtaaa
ctcctcaatgactccacattccacacatcactcctggcctgcgctttggaggtagtcatg
gcaacatatggagagagcagttttaagactggaggatacaaccatggaggtggtgaccaa
gctgagacagatgtgtgtttcccctggatactggatgtgttcaaactctccgcctttgac
ttctacaaagtcatcgagagctttatcaaggctgaccctacactgagcaaagatatcgtc
aaacatttggagacgtgtgagaacctcatcatggagaggattgcatggaggacggcctcc
ccgctgtttgagctgctgaaacaggagcatgagggcggagcagcagagcaggtggagacc
ccagccagtttcagccaaccactgcagcacaaccacaccgcagcagacctatatctgtcc
cccatgcgcccgggccatcgtgccttacctcctgagtccccagccactgccagctctcaa
gcttcctctcaggttctgacccagcccgctggtcagactccacgacccccaaagtccaac
tctctcagcctcttctataaaaagttgtaccgcttggcttatacaagactaaagatactc
tgctcctacctgttgtcctcccaccctgaactggagcccatcatatggacactattccag
cacacactgcagtacgagtatgagctgatgagagaccgtcacctcgaccagttgatgatg
tcagccatgtatgccatatgtaaagtgaagagtgttgatctacgcttcaagaccatcgtc
acggcatacaagaacatggccaacaccaaccaggagacttttaagcatgtgttaatcact
gaaggccactatgactccataattgtcttttacaatcaagtgttcatgcagaagctgaaa
accaacatcctgcagtatgcttctacccggccgcctaccctctctccaatcccacaaata
ccacgcagcccctacaagtttccaaattcacctctgcgtgtgcctggcagcaataatgtg
tacatctcccctctgaaaagcccacgcatgtccccgggtatcatgactcctcgctccaga
atgttggtatcgatcggtgaatcttttgggctgtccagtcgcttccaaaagatcaaccag
atggtcaacagcagcgatcggtcctttaagaggactctggatctcggctctgctccaaag
cctctgaagaggttacggttcgatgtggacggacaggatgaagccgatggcagcaaatct
ggtggagattctacactgatacagaagcttgcagagatgagctccactcggagtcgtatg
caggagcagaagatgaaggaggacgcagaagcaaggaaggagtaa
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