Seriola dumerili (greater amberjack): 111236046
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Entry
111236046 CDS
T05606
Symbol
arhgef1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04270
Vascular smooth muscle contraction
sdu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
111236046 (arhgef1)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
111236046 (arhgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sdu04131
]
111236046 (arhgef1)
Membrane trafficking [BR:
sdu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
111236046 (arhgef1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
Motif
Other DBs
NCBI-GeneID:
111236046
NCBI-ProteinID:
XP_022620365
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MDAEDAHFGQGVFGAQCSNPAMSIIGAEDEDFENDLNDAVEDQCALFDHIDLLKDRPTHL
LIFMQHVFLQFDPAPMLCYLHADLFRTLSAKETKKQFVEFYNTFLDKGAILRVTVPYNVS
SELDRTRPDLLPEETQRRFAQDVQFMQASEVAKQLEDFRQKRKMGMTPNEAELVDVESHY
STDRIPVEMKEKSVAENLLDKMSETQPTIVSDEEKCQSIFSAVAFYMKHLGVKTRAVDSK
KSRGGFFRRQLVKNKKDESTKAKPRGVFPGISWIAGSTEVKPKMEAEVEKEKVTQERKGP
APSRGSLTDPAALSLPSRKSGSSGGPASLPGLEVTDGSGNNISATNSPESSHSDGLSSNR
LEPSTVSDGGDVSPVVLAGALTIGEPASPNDTPTEENPEKDRRKTSRKVIRSESARVDRH
SSRRRGSSRAKQSRSRSDVDLQPLSTTTTSPAPLTPQHLHPVEGPVLVPEGPGHSPTSPS
PQLEEVEPRFLEFESDPTNWRELALPEALSKLNKKETKRQEVINELFATEHAHVRMLSVL
QMVFSKPLEREELLTATELAAIFPNLDEIIDMHYNFYENLKKLRGDDNFIVRSISPTVLN
RFGGTEGEWFQKLTARFCSHQSWALDQIKSRQKSQPRFNSFILEAESKPQCRRLQLKDII
PIEMQRLTKYPLLLENIAKSTEDLAEKEKIQQSAECCRKILNHVNEEVKVMENLLTLKDY
QRRLDTSGLKPSNELYTEYKNIDLTQKKMLYEGAVTWKVTKEKAIEVQCVLLGDMLVLLQ
RQDDKMVLKCQSKSNIAVQEGKQMLSPIIKLDSVFLREVATDRKAFYVIFTWDSGAQIYE
LVAQSVVERKTWTEVIKTAVDDLKKSGTPMRLTLPPGGGGAPFSPSSLTAPLSPTENGGS
KNISDQDKDSLTDEKSSDPRHRLIDFLSDKGFDLIGHSNSDQEKVAISALDEVMLLKRLL
IGSISLSEDSQPDEENGEEQSQRPSQEMDSCQSTEENQTTDRGAEEKSDNTCEKEGAGTK
GEEERSISAPLVLSQERMVEVCRRLCSLEEHLKRLQIVEEEHHRLQEALSKFSLEGGNFQ
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgaagatgcccacttcgggcagggtgtgtttggggctcagtgctctaaccca
gccatgagcatcattggggctgaggatgaggatttcgagaatgatctgaacgatgcggtg
gaagaccagtgtgcactctttgaccatatagatttgttgaaagatcggccaacccacctg
ctgatcttcatgcaacatgtctttttacagtttgaccctgctcccatgctgtgttacctc
catgctgacctcttcaggaccctcagtgccaaagagaccaagaagcaatttgtggagttc
tacaacaccttcttggacaagggtgcaattctcagagtgacagtaccatacaatgtgtcc
tctgagttggaccgaacccgtccagatctgctccctgaggaaacccaaagacgctttgcc
caggatgttcagttcatgcaggcttctgaagtggccaaacagctggaggacttcaggcag
aagaggaagatgggtatgacccccaatgaggctgagctggtcgacgtggagagccactat
tccaccgaccgcatcccggtggagatgaaggagaagtctgtggccgagaacctgctggac
aaaatgtctgagacacaaccaacaattgtctcggacgaggaaaaatgccaatccatcttt
tcagcggtcgccttctacatgaagcaccttggggttaaaaccagggcagttgacagtaag
aagtccagaggaggtttcttcaggagacaactggtaaagaataagaaagatgaatccacg
aaggccaagcccagaggggtgtttcctggcattagctggatcgcaggcagcactgaggtc
aaacctaaaatggaggctgaagtggaaaaggagaaagtgactcaggagcgtaagggtcca
gctcccagcagaggctccttgaccgaccctgcagccctttccctacccagcaggaagtct
ggttccagcggaggccccgcctccctacctggcctagaggtcactgatggctcaggcaac
aacatcagcgccaccaacagccccgagtcttcacacagtgatggcctctcgagcaatcgc
ttagagccttcgaccgtgtcagatgggggcgatgtgtctcctgtcgtgctggccggtgcg
ctgaccattggggagcccgcctcccccaacgacactcccacagaggagaacccggagaaa
gacagacggaagacaagtaggaaagtgattcgtagcgagagtgctcgcgtggaccggcac
tcatctcgtcgccgtggctcttccagggccaaacagtcccgctcccgtagtgatgtggac
ctccagccgctttctaccacgacaacatcacctgccccgctcaccccccagcacctccat
cctgtcgagggaccggttttagttcctgaagggcctggccactccccaaccagcccttcc
ccacagctggaggaggtggagccacgcttcctggaatttgagagtgacccgaccaactgg
agggagctggccctccctgaagctttgtccaaactcaacaagaaggagaccaagaggcag
gaggtcatcaatgagttgttcgcgacagagcatgcccacgtgcgaatgttaagtgttctt
cagatggtcttctctaagcctttggagagagaggagctcctgaccgccactgagcttgct
gccatcttccccaacttggacgagatcattgacatgcactataacttctatgagaacctg
aagaaactgcgtggggatgacaatttcatagtcagatccatcagccccacagtgctcaac
aggtttggcggcacagagggggagtggttccagaaattgacagctcggttctgcagtcac
cagtcgtgggccttggaccagatcaagagcaggcagaagagccagccacgcttcaactcc
ttcatactggaggcagagagtaagccccagtgtcgcaggctgcaactcaaggacatcatt
cctatagagatgcagagactgaccaagtacccattgctgctggagaatattgccaagagc
acagaggacctggcagagaaggagaagatccaacagagcgcagagtgctgcagaaagatc
ctcaaccatgtcaatgaggaggtcaaagtgatggagaacctattgactctgaaggactac
cagcgtagattggacacatcagggctcaaaccaagtaatgagctttatactgaatataag
aacattgacctgactcagaagaagatgctttatgaaggtgctgtgacctggaaagtcaca
aaagagaaagcaattgaggtgcagtgtgtgctgctaggggacatgctggtgctcctacag
aggcaggatgacaagatggtcctcaaatgccagagcaagagtaacatcgccgtgcaggag
ggcaagcagatgctgagccccatcatcaagctagactcagtctttctccgcgaggtggcc
acagatcgaaaggccttctacgtgatatttacctgggatagcggtgctcagatctatgag
ctggtggcccaatctgttgtagagaggaaaacctggactgaggtgataaagactgcagtg
gatgatctgaagaagagtggaacacccatgaggttaacgctgcctcctggaggtggagga
gctcctttcagtccctcctcgctgactgcgcctctgagcccgactgagaatggaggttca
aaaaacatcagtgatcaagataaggacagcttgacggatgaaaagtcttcagaccccagg
cacaggctgattgatttcctgtcagacaaaggcttcgacttgataggccactccaacagc
gatcaggagaaggttgccatcagtgctttggatgaagtcatgttactgaaaaggctgctg
atcggcagcatcagcctatcagaagactcgcagcctgatgaagaaaacggagaggagcaa
tcacagaggcccagtcaagaaatggatagctgtcaatcaacagaagaaaaccagaccaca
gacagaggagcggaggagaagagtgataacacttgtgaaaaagagggtgcagggacgaaa
ggagaggaggagagaagcatcagtgcgcccctggtgttgtcccaggagaggatggttgaa
gtgtgccgtaggctctgcagtctggaggaacatctaaagagattacagattgtagaagag
gagcaccacaggctgcaggaggccctttccaagttctccctggagggaggcaacttccag
taa
DBGET
integrated database retrieval system
