KEGG   Seriola dumerili (greater amberjack): 111236089
Entry
111236089         CDS       T05606                                 
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
  KO
K03174  TNF receptor-associated factor 3
Organism
sdu  Seriola dumerili (greater amberjack)
Pathway
sdu04620  Toll-like receptor signaling pathway
sdu04621  NOD-like receptor signaling pathway
sdu04622  RIG-I-like receptor signaling pathway
sdu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sdu00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    111236089 (traf3)
   04621 NOD-like receptor signaling pathway
    111236089 (traf3)
   04622 RIG-I-like receptor signaling pathway
    111236089 (traf3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    111236089 (traf3)
SSDB
Motif
Pfam: TRAF-mep_MATH zf-TRAF TRAF3_RING zf-C3HC4 zf-C3HC4_2 Sina_ZnF zf-RING_UBOX ATG16 zf-TRAF_2 zf-C3HC4_4 Crescentin MctB DUF4201 TolA_bind_tri zf-RING_2 EzrA Fzo_mitofusin DUF724 Baculo_PEP_C FlaC_arch UPF0242 Fez1
Other DBs
NCBI-GeneID: 111236089
NCBI-ProteinID: XP_022620420
LinkDB
Position
Unknown
AA seq 595 aa
MSAGRSADGREVQIPLQQVAPSLAASISVAAPITLSSHRPANPWPSSDPAASQGVPAGFL
PLHGGFRDHFVETPEAKYCCEVCRLVLCQPRQTECGHRFCQSCINNILSQQNPVCPADME
PLFKDKIFRDVCCHREIMALKVYCRSEANGCQEQMSLHQIPDHLNVCPFFEVPCPLGKCK
ERMMRKEIPDHLSWKCKHRETTCEFCMTKMPLTELQKHKETVCPTFPVSCPNHCSFSSLP
RSELSNHQHDCPKAQVSCQFHRYGCTFKGLNQEMRQHESTFAAEHLRLMANRNSSLENKV
EDVKGELMERYKVLPALSSRLSELENQNDELRDKNRQMEQKLATMQKLMSSHSEKLLEVE
LELRSLRLLRDEVEDLRGTLENVRTRLNALEQGGRSGTGSTTHTLAPLETQLNRHDDMLS
VHEIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAAKTLSLYSQPFYTGYFGYK
MCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFK
PDPNSSSFRRPAAEMNIASGCPLFVSQSVLETGSYIKDDTIFIKVTVDTSDLPDP
NT seq 1788 nt   +upstreamnt  +downstreamnt
atgtcagcggggaggagtgctgatggaagggaggtgcagattcccctccagcaggtggcg
ccctccctggccgcttccatctctgtggccgctcccatcaccctgtcctctcaccgtcca
gccaatccctggccttccagcgaccccgctgcctcacaaggtgtacctgcaggtttcctg
ccccttcacggaggattcagagaccactttgtagagactccagaagccaaatactgttgt
gaagtgtgcaggctggtcctgtgtcagccccgccagactgagtgtggtcaccgcttctgt
cagagctgcatcaacaacatcctcagtcagcaaaacccggtgtgtccagctgacatggag
ccgctgttcaaagacaagatctttagagatgtttgctgccatcgggagatcatggctctg
aaggtttactgtcgaagtgaagccaacggctgtcaggagcagatgagtctgcaccagata
cctgaccacctgaacgtgtgtccattctttgaggttccctgtccactgggtaaatgtaaa
gagcgaatgatgaggaaagagattcccgaccatctgagctggaaatgtaaacacagagag
accacctgcgagttctgcatgaccaagatgcctctgactgaactgcagaaacacaaagag
acggtgtgtccgacgttcccagtgtcctgtccaaaccactgctccttctcctccctgccc
cggagtgagttgtccaatcaccaacacgactgtcccaaagctcaggtgagctgtcagttc
caccgctacggctgcaccttcaagggtttgaaccaagaaatgaggcaacatgagtccacg
ttcgcagctgaacacctgagattgatggccaacaggaactcctcgttagagaacaaggtg
gaggatgttaaaggtgagctgatggagaggtacaaagtgcttcctgctctcagcagccgt
ctgtctgaactggagaaccagaacgacgagctgagagacaagaaccgacagatggagcag
aaactggccaccatgcagaaactgatgagctctcactcagagaagctcctggaggtggag
ctggagcttcgttctctcaggctgctcagagacgaagtggaagacctgagaggaacgtta
gagaacgtacggacgaggctgaatgctctggaacaaggggggcgcagcggaactggatcc
acaacacacactctggcgcccctggagactcagctgaaccgacatgacgacatgctaagt
gtccatgagatccgattggccgacatggacctgcgtttccaggtgctggagacagcgagc
tacaatgggactctgatctggaagatccgcgactacaagagacgaaaacaggaagcggtg
gcggcaaagacgctgtcgctgtattcacagccattttacaccggatatttcggatacaag
atgtgcgcccgagtctacctgaacggagacggcatgggcaagggaacgcacctttccctg
ttctttgtggtgatgaggggtgaatacgatgccctgctgccctggcccttcaaacagaag
gtgactctgatgctgatggaccagggtccatcaaggaaacacctgggtgatgcctttaaa
cctgatcccaacagcagcagcttcagacgtcctgcagcagagatgaacattgcctccggc
tgtcctctgtttgtatctcagagcgtcctggagaccggcagctacatcaaagacgacacc
atatttatcaaggttactgtggatacctctgacctccctgacccgtga

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