Seriola dumerili (greater amberjack): 111237097
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Entry
111237097 CDS
T05606
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu00514
Other types of O-glycan biosynthesis
sdu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
111237097 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111237097 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sdu01003
]
111237097 (rfng)
Enzymes [BR:
sdu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
111237097 (rfng)
Glycosyltransferases [BR:
sdu01003
]
Glycan extension
O-Glycan
111237097 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
111237097
NCBI-ProteinID:
XP_022621785
UniProt:
A0A3B4UVR2
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MNLLHRPVRMHIASVGVSKFCFLFSLAFCGLLLLLLPALQPPARQVDLPQPRPQIRPTTS
HHTRVPAVSVHAGETDLSTGLNGSSVGQGGSTETEVTRNDKSEVGSKKSQERGAPPGGKI
GGGLSGSKSHDPLELKDIFIAVKTTRKYHKSRLELLIQTWVSQAKEQTYMFTDGEDKELR
MRTGANIINTNCSAAHTRQALCCKMSVEYDKFIESQKKWFCHVDDDNYVILPSLLQMLSS
YHHSQDVYLGRPSLDHPIEAAERVKSDGSVSVKFWFATGGAGFCISRGLALKMSPWASLG
NFISTAEKIRLPDDCTIGYIIEALLEVTLTHTHLFHSHLENLQKLPTDSVLEQVTLSYGG
FENRRNVVSIVGGFSLAEDPTRFKTVHCLLYPDTDWCPRRKPRHKN
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgctccatcggccagtcaggatgcacatagcttcagtgggtgtcagcaagttc
tgcttcctgttttccctcgcattctgcggcctcctgcttctgctcctcccggccctccag
cctccagctcgccaggtggacctgcctcagccccgaccccaaatcagacctacaacgtcg
caccacaccagggttccagcagtgtccgtccacgctggcgaaactgatttgtccacaggg
ctgaatgggagctcagtgggccaggggggatccacagagactgaagttaccaggaatgat
aagagtgaggtgggctccaaaaaaagccaagaaagaggggctccccctggaggaaagatt
ggtggtggactttcagggtctaagtcccatgacccgttagagttgaaggacatttttatt
gctgtgaagactaccaggaagtaccacaagtccagactggagctcctgattcagacctgg
gtttcccaagcaaaagaacagacctacatgttcactgacggtgaggacaaagagctgcga
atgagaacaggagccaacatcatcaacactaactgctcagcagctcacactcgtcaggct
ctgtgctgcaagatgtcggtggagtacgacaaattcatcgagtctcagaaaaagtggttc
tgtcatgtggacgatgataactacgtgattctgcccagcctgctgcagatgctctcctcc
taccaccacagccaggatgtgtacctgggccggcccagtctggatcaccctatagaagct
gcagagagagtcaagagtgacggatcagtgtctgttaagttctggtttgccacaggtgga
gcagggttctgtatcagcagaggtctggctctgaaaatgagcccatgggccagtttgggg
aatttcatcagcacggcggagaagatccgactcccagacgactgcaccatcggctacatc
atcgaggcgctgctggaggtcaccctaacacacacacacctcttccattctcacctggag
aacctgcagaagctgcccactgactctgtgctggagcaggtgactctcagctatggaggc
tttgagaacagaaggaatgtggtcagcattgttggaggcttttcactggctgaagacccg
acaaggtttaagacagtccactgcctcctgtatccagatactgactggtgtccaaggcgc
aaacctcgccacaaaaactga
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