Seriola dumerili (greater amberjack): 111239485
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Entry
111239485 CDS
T05606
Name
(RefSeq) platelet-derived growth factor receptor beta-like
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04010
MAPK signaling pathway
sdu04020
Calcium signaling pathway
sdu04510
Focal adhesion
sdu04540
Gap junction
sdu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111239485
04020 Calcium signaling pathway
111239485
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111239485
04540 Gap junction
111239485
09142 Cell motility
04810 Regulation of actin cytoskeleton
111239485
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sdu01001
]
111239485
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sdu04090
]
111239485
Enzymes [BR:
sdu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
111239485
Protein kinases [BR:
sdu01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
111239485
CD molecules [BR:
sdu04090
]
Proteins
111239485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
C2-set_2
VEGFR-1-like_Ig-like
APH
WD40_MABP1-WDR62_2nd
RIFIN
T9SS_plug_1st
Baculo_11_kDa
Motif
Other DBs
NCBI-GeneID:
111239485
NCBI-ProteinID:
XP_022625090
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MAYIKWQTGSLNLLHFLLGVFLVCPEGGVGLELMPSASKVLLNSTSSFTVVCSGWSQVTW
RVPQDSQVDGVVVENRGSSSVLQLFNVTWRNSGRYTCEEGSSYQSREIDIFIPGKGPDEW
FVPLGPGVVMKEAEEDTIPCVVSDPRLNVSLYERPGWTLVTGTTYEPGRGFTGRLNDTSY
VCLAALGGEERESQVYYVFSIVVPKVMEVDLTVSSSVLKQGEVLTVNCTVKDTEMVFFSW
YFPRRQEVEPLTDFLPNRIRSFVNISTATVADSGVYTCVVQETMQGRTVMKNITVTVLDR
GYVYLWPSGETNVSSLLHHTVEFSVEVDAHPAPTVLWTKDNQTVVTETTSVTTTHLMGSR
YVSTLTLVRVQMDQTGNYTATVSNDDDIDEIVFKLEVKAPPRITSLSEVGSKAVLCVSEG
APPPSVTWYICHSSHRCSNVTGAWRSLSAASEGASLQENITEVEERGVTQVRSQLTLQAL
SSLSAVRCEARNTAGRRARDLRVLSTSLLSQVAVLAAVLVLVVIAVFFLIVLILLWRKKP
RYEVRWKVIESVSPDGQQYTYLDPAHLPYNSTWEIPRDNVVLGQVLGSGAFGRVVEANVS
GLIHSHSTTKVAVKMVKPSSGAVQSLMSELKVLVHLGPHLNVVNLLGACTRGGPVYLITE
FCRHGDLVNYLQRNKHTFQQSDTHTKSDSDGGYMDMNKEESAQYVAMKELSYADIEPAVY
ETPYIAPDQQEASSLLLSDSPLLSLNDLLSFSYQISQAMDFLCSRSCVHRDLAARNILVC
EGKLVKVCDFGLARDLTKDQDYIARGNSFLPVKWMSPESIFQNIYSSQSDVWSFGVLLWE
IFSLGGSPYPDLPMTQEFYSALKRGYRMTRPEHAPHNAFELMKCCWEEKPQSRPSFSSLV
VSVGNMLTDDYNKRYLQLTENFLKGDNPAVVRSTLSLSRAVEHQTDTHGSPTPQVNVHQL
EAELEEAGPSQGTYIIPIADVTIETSTCTALDAVSPPPSDPPLDTTSQDDSGPQEVTSSE
GQEEAEEPRASPCSGEEEEESSL
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacatcaaatggcaaacaggaagtctaaacctgctgcacttcctgttaggtgtg
ttcctggtttgccctgaagggggtgtcggtctggagctgatgccgtcagcctccaaagtt
ttactgaactccacctccagcttcactgtggtgtgttcggggtggagtcaggtgacgtgg
cgggtacctcaggactctcaggtagacggggttgtggtggagaatcggggttccagcagc
gtcctgcagctctttaatgtcacctggaggaattctgggcgatacacctgtgaggagggg
tcgtcctatcagagcagagagattgacatcttcatacctggaaaaggtccggatgaatgg
tttgtcccactgggtccaggtgtggtgatgaaggaggcggaggaagacaccatcccctgc
gtggtgtccgacccgcggctcaacgtctcgctgtatgaacgtcctggctggacactggtt
accgggacgacatatgagccgggccgtggcttcacaggtcgtctcaacgacacgtcatac
gtgtgcttggccgccctcggaggagaggagagggagtcccaggtgtactacgtcttcagc
atcgtagttcctaaggtgatggaggtggacctgacggtgtccagcagtgtgttgaaacag
ggggaggttctcactgtgaactgcactgtcaaagacactgagatggttttcttctcctgg
tactttccccgcagacaggaagtcgagccgctgacagactttctgcccaatcggatccgt
tccttcgttaacatctccacggcaacagtggcagattctggtgtgtatacgtgtgtggtg
caggagaccatgcagggacggactgtgatgaaaaacatcacagtgacagtactggatcga
gggtatgtctacctgtggccctcaggtgagaccaatgtatcgtctctcctccaccacacg
gtggagttcagtgtggaggtcgacgcccaccccgcccccactgtcctctggaccaaagac
aaccagactgttgtcacggaaaccacctccgtcaccaccacacacctaatgggcagcagg
tatgtgagcacactgacactggttcgagtccagatggatcagacaggaaattacacagca
accgtttccaatgatgacgacatagacgagattgttttcaaactggaggtcaaagcaccc
cccaggatcacgtctctgtcagaggttggcagtaaggcagtgctttgtgtcagtgaggga
gctccgcctccttctgtcacctggtacatctgtcacagctcacacaggtgtagtaatgtc
acgggcgcctggaggagcctatcagcagcctcagagggcgcttctctgcaggagaacatc
actgaggtggaggagagaggagttacccaggtacgcagtcagttgactctccaggctctc
agctctctgtcagctgttcgctgtgaagccagaaacacggcaggacgccgagccagagac
ctgcgagtactgtccacctctctcctgtctcaggttgcagtcttagcagcggttctggtt
ctggttgtcattgccgtcttcttcctcatcgtcctcatcctcctctggagaaaaaaacct
cgttatgaagttcgctggaaggtgattgagtctgtgagtcctgacggacagcagtacacc
tacctggaccccgcccacctgccctataactccacctgggaaataccacgagacaacgta
gtactaggtcaggtgctgggttcaggtgcatttggtcgtgtggttgaggcgaacgtctct
ggtctgattcactctcattctacaactaaagtagctgtgaagatggtcaaaccaagcagc
ggtgcagttcagtctctgatgtcagagttgaaggttttggttcatcttggtcctcacctg
aatgttgtcaacctgctgggagcctgcacgagaggaggccctgtctatctgatcactgag
ttctgtcgtcatggagacctggtgaactacctgcagagaaacaaacacaccttccagcag
agtgacacacacaccaagagcgacagtgatggaggttatatggacatgaataaagaggag
agcgctcagtacgtcgccatgaaggagctcagctacgccgacatcgaacctgcggtgtac
gagacgccgtacatagcaccagaccagcaggaggcgtcctctctcctcctcagtgactct
cctctcctcagcctcaatgacctcctcagcttctcctaccagatctctcaggccatggac
ttcctctgctccagaagctgtgtccacagagacctggcagcgaggaacatcctggtctgt
gaggggaagctggtgaaggtctgtgacttcggtttggctcgagacctgacaaaggatcag
gactatatcgccagaggaaacagcttcctgccggtcaagtggatgtctccagagagtatc
ttccagaacatttacagctctcagagcgacgtatggtccttcggagtcttactgtgggag
atcttctctctgggtgggagcccgtaccccgacctcccgatgacccaggagttttactct
gctctgaagagaggatacaggatgacccgacctgaacacgctccccataacgcctttgag
ctgatgaaatgctgctgggaggagaaacctcagtctcgaccttccttctcatcgctggtc
gtctctgtaggaaacatgttgactgacgactacaacaagcgttacctccagctgacggag
aacttcctgaaaggtgacaatccagctgttgttcgatccacactgagtttatccagagct
gttgaacatcagacggacacacacggaagtcccacccctcaggtgaatgttcatcagttg
gaggcagagctagaggaggcaggcccctcccagggcacctacataatcccgattgctgac
gttaccatagaaacaagcacctgcactgcgctggacgcagtcagcccccccccctcagat
cctcccctcgacaccacctctcaggatgattcaggaccacaggaagtgacatcatcagaa
ggtcaagaggaagctgaggagcctcgtgcttcaccgtgcagtggtgaggaagaggaggag
agcagcctgtga
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integrated database retrieval system
