Seriola dumerili (greater amberjack): 111239793
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Entry
111239793 CDS
T05606
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
sdu
Seriola dumerili (greater amberjack)
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111239793
Ion channels [BR:
sdu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
111239793
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
111239793
NCBI-ProteinID:
XP_022625421
LinkDB
All DBs
Position
Unknown
AA seq
1752 aa
AA seq
DB search
MAPLLPPLGSEVFRRFTQASLEEIQRRYEAEEKERQRKKEKNIEIAEEDLPKPASDLEAG
KPLPFIYGDPPPELLNTPLEELDPFYQSQKTFIVLSKGNIIYRFNADPACYLLSPFSRLR
TIAIRILIHSLFSLFIMLTILTNCAFMTMSDPPAWSKTVEYVFTGIYTFEATVKVLSRGF
CVGDFTFLRDPWNWLDFMVISMAYLTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLADVMILTVFCLSVFALIGLQLFMGNLRQKCVLMPQQLRNHTPDVSGDFDFY
EYINNPENYYYVPGQLDALLCGNSSDAGVCPEGYVCLKVGRNPNYGYTSYDSFGWAFLAL
FRLMTQDFWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYAEQNEATCA
EAKQKEEEYAEILEALKRREEEQATCRAAPSQNPDSTHPPVDGQEVEQEHNTMEDFEDDQ
RPCPPCWYSFADIFLKWNCCGCWRWLKIRLYTIVMDPFFDLGITICIVLNTVFMAMEHYP
MTNQFEELLSVGNLVFTGIFTAEMVLKLLAMDPYYYFQVGWNIFDSIIVTMSLVELGLAN
VQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQL
FGKNYKDCVCRISGDCELPRWHMNDFFHAFLIIFRILCGEWIETMWDCMEVSGQTMCLIV
FMMVLVIGNLVVLNLFLALLLSSFSGDNLAAPEDEGENNLQIAINRINRAVAWIKSWILE
QIWTVLGKKRHVNPDHIVDGDDSDTKEVLHLTFVTSDQPVSEVNALGCSHDNLSSNYHNI
TFLKVPIAESESESESESESDFETPENEDEEEDEEEDKKEKLSQGEESSTCSTVQKLPEV
QEEEDDEDQDTNTPEDCCTDNCYRRCPRLDIDTSQGRGKVWSNFRRTCFSIVEHNYFETF
IIFMILLSSGALAFEDIYLEQRQVIKTVLEYADQVFTYVFVVEMILKWIAYGFKIYFTNA
WCWLDFLIVDVSLVSLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGA
IPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCFNETSEEIFLPADINNKTECFALINEN
MSEVRWKNLKVNYDNVGMGYLSLLQVATFKGWMDIMYAAVDSREVEDQPVYEGNLYMYLY
FVCFIIFGSFFTLNLFIGVIIDNFNQQKAKLGGTDIFMTEEQKKYYNAMKKLGSKKPQKP
VPRPVNKFQGLVFDLVTKQFFDIFIMVLICLNMVTMMVETDEQSLEKEIILYWVNLVFII
VFTTECSLKIIALRQHYFAVGWNIFDFVVVILSIVGLLLADLIEKYFVSPTLFRVIRLAR
IGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVRKEAMID
DIFNFESFGNSMICLFMITTSAGWDGLLSPIMNTAPDCDPDIENPGSMVRGNCGSPAVGI
VFFTTYIIMSFLVVVNMYIAIILENFNVATEESTDPLCEDDFEMFYETWEKFDPDASQFI
QYSKLSDFCDTLQEPLRIPKPNTIKLIHMDLPLVPGDKIHCLDILLALTAQVLGDSGAMD
TLKASMEEKFMANNPSKVSYEPISSTLRRKQEEVAAMVIQRAYRKHLLRRTVKLASYKYR
EKTDRRRDEDLPPETEGLLFKRISQLYGDSQDTQEQPPPARVELQSELLLHAAPPLSTPD
FLRDENLRESIV
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctctgcttccccctcttggttcggaggtcttcagacgcttcacgcaagcctcg
ctagaggaaattcaacgacgatatgaagccgaggagaaggagcgacagaggaagaaagag
aagaacatcgagatagcagaagaagatcttcctaaaccagcaagtgacttggaggccggc
aagcccctcccatttatctatggagacccgccccctgagcttctcaacaccccattggag
gagctggatcccttctaccaatcacagaagacattcatcgtgctcagtaaaggaaacatc
atctacaggtttaacgctgacccggcctgttacctgctgagtccgttcagccgtctgagg
accatcgccatcaggatcctgatccactctttattcagtttgttcatcatgctgacgatt
ctgaccaactgtgcgttcatgacgatgagtgatcctccagcatggagcaagactgtggag
tacgtcttcacaggcatctacacgtttgaagcgacggtcaaagttctctcccgaggattc
tgtgtgggagatttcaccttcctcagagacccctggaactggctggatttcatggtcatc
agcatggcgtatcttacagagtttgtagacttggggaatgtttctgcgttgagaacattc
agagttctccgagccctgaagaccatcacagtcatccccggtttaaagactattgtggga
gctctcatccaatcagtcaagaagttggctgatgtcatgatcctgacagtgttctgcctc
agtgtctttgccctgattggtctgcagctctttatgggaaacctgagacagaagtgtgtc
ctgatgccacaacagcttcgtaaccacacacctgacgtcagcggtgactttgatttctat
gagtacatcaataatccagagaactactactacgtgcctgggcagctcgatgctctactc
tgtggaaacagctctgatgctggggtctgtcccgagggttatgtctgtctaaaggtgggg
agaaatccaaactatggctacaccagctacgactcttttggttgggcattcctggctctg
ttcagactgatgacccaggacttctgggaaaacctcttccagctgacactacgagcggca
ggtaaaacctatatgattttcttcgtggtcgtcatcttcctcggctcgttctacctcatt
aacctgattctggctgtggtcgccatggcgtatgctgagcagaacgaggccacgtgtgct
gaggccaaacagaaggaggaggagtacgccgagatcctggaggcgctgaagaggagagag
gaggagcaggcaacctgcagggctgcaccctcccagaatccagactcaacacacccacct
gtggacggacaggaagtcgaacaagaacacaatactatggaagactttgaggacgaccag
aggccatgtcctccatgttggtattcctttgctgacatcttcctgaagtggaactgctgc
ggttgctggcggtggctcaaaatacggctctacaccatcgtcatggacccgttcttcgac
cttggcatcaccatctgcatcgtcctcaacaccgtcttcatggccatggagcactatcca
atgacgaatcagtttgaggagctactgagtgtcggaaacctggtcttcacagggatcttc
acagcggagatggtgctcaaacttctggccatggacccgtactactacttccaggtgggg
tggaacatctttgacagcatcatcgtgaccatgagtctggtggagctgggattggctaac
gttcagggcctgtctgtgctgcgctcgttccgattgatgcgagtctttaagctcgccaag
tcttggccgaccctcaacatgctgatcaagatcattggaaactcggtgggggctctgggg
aacctgactctggtcctcgccatcatcgttttcatcttcgccgtcgtcgggatgcagctg
tttgggaagaactacaaagactgcgtctgtcgcatctcgggggactgcgagcttcctcgc
tggcacatgaatgacttcttccacgccttcctcatcatcttcaggatcctgtgtggagaa
tggatcgagaccatgtgggactgcatggaggtctcgggtcagaccatgtgtctgattgtg
ttcatgatggtcctggtcatcggaaaccttgttgtcctgaacctgttcctggccttgttg
ctgagctcattcagtggtgataatctggcagctccagaggatgaaggtgaaaacaacttg
cagatcgccataaatcggatcaacagggccgtggcctggatcaagtcctggatcctagag
cagatttggactgtcttgggaaagaagaggcatgtcaacccagaccacattgttgacggt
gacgacagcgacacaaaggaggttttgcatttgacctttgtgacctcagaccagccagtg
tcagaggtcaatgccctcggctgtagccacgacaacctgagcagcaactaccacaacatc
accttcctgaaggtgcccatcgcggagtccgagtctgagtccgagtccgagtctgagtcc
gactttgagacacctgaaaatgaagatgaagaagaggatgaagaggaagacaagaaagaa
aagctctcccaaggtgaagagtcgtcaacctgcagcacagtacagaaacttcctgaagtc
caagaggaagaggacgatgaagatcaggatactaatacacctgaggactgctgcactgac
aactgttaccgtcgctgcccgcgcctggacatagacacatcccagggcagggggaaggtc
tggtctaacttcaggagaacctgtttctccattgtggaacacaactactttgagaccttc
atcatcttcatgatcctgctcagcagcggagctctggcatttgaggacatctacctggag
cagcgtcaggtcataaagacggttctggaatatgcagaccaggtattcacctacgtgttt
gtggtagagatgattctcaagtggatcgcctacggattcaagatctacttcaccaacgcc
tggtgctggctggacttccttattgtagacgtgtctctagtgtctctgacagctaacatc
ctgggatactctgagctgggagccatcaagtctctgaggactctaagagctctgaggccc
ctgagggccctgtcccgcttcgagggcatgagggtggtggtgaatgccctggtcggagcg
atcccctccatctttaacgtgctgctggtgtgtctgatcttctggttgatcttcagcatc
atgggagtgaatttgtttgcaggaaagttttattactgtttcaatgagacgtcagaggag
atatttctccctgcggacatcaacaataagaccgagtgtttcgctctgatcaatgaaaac
atgtctgaggtccgctggaagaacctgaaggtcaactacgacaatgtgggaatgggctac
ctgtcgctgctgcaagtggccacatttaaaggctggatggacatcatgtacgctgcagtg
gactctagagaggtggaggaccagccggtgtacgagggtaacctgtacatgtacctgtac
ttcgtctgtttcatcatctttggctccttcttcaccctcaacctcttcattggagtcatc
atcgacaacttcaaccagcagaaagccaagttgggaggaacagatatcttcatgacagag
gagcagaaaaaatattacaatgccatgaagaaactgggctctaagaaacctcagaaacct
gttccacgacctgttaacaagttccagggtctggtctttgacctggtcactaaacagttt
ttcgacatcttcatcatggtgttgatctgcctcaacatggtgaccatgatggtggagaca
gacgagcaaagcctggagaaagagatcatcttgtactgggtcaacctggtcttcatcatc
gtcttcaccactgagtgctctctaaagatcatcgcactcaggcagcactactttgctgtc
ggctggaacatttttgactttgtagtggtcatcctgtccattgtaggcctcctccttgct
gatctcatagagaagtattttgtttcgcccacactctttcgtgtgatccgattggctcgt
atcggtcgaatccttcgtcttatccgaggagctaagggaatccggacacttctgtttgcc
ctgatgatgtcacttcctgccctcttcaacattggtctgctcctcttcctcatcatgttc
atcttctccatcttcggaatgtcaaactttgcctatgtgaggaaggaggccatgatagac
gacatttttaactttgagagctttgggaacagcatgatctgtttgtttatgatcaccaca
tcagctggatgggacggcctgctgagtcccatcatgaacacagcgccagactgtgaccca
gacatcgagaaccccggatcaatggtcagagggaactgtggcagcccggcggtgggcatt
gtcttcttcaccacctacattatcatgtccttcctggtggtggtcaacatgtacatcgcc
atcatcctggagaacttcaacgtggccacagaggagagcaccgacccgctgtgtgaggat
gactttgagatgttttatgaaacctgggagaagtttgaccccgatgcctcacagtttata
cagtacagtaaactgtcagacttctgcgacactctccaggaacctctgaggattcccaaa
cccaacaccatcaaactgatccacatggatctgcctctggttcctggagacaagatccat
tgtcttgacattctgctggcactcactgcacaggtgttgggggattcaggagcaatggac
acactcaaagccagcatggaggagaaattcatggccaacaacccctcaaaggtgtcgtat
gaaccgatcagcagcaccctgcggaggaaacaggaggaggtggcggcgatggtgatccag
cgagcgtacaggaaacaccttctgcggcggacggtcaaattggcatcttacaaataccgc
gagaagacagatagacggcgagacgaggatttgcccccagagacagaaggacttctcttt
aaacgaatcagtcagctgtatggagacagccaggacacacaggagcaacctcctccagcc
cgagtggagcttcagagtgagttactcctccatgccgctcctcccctgagcacccccgac
tttctgcgagatgagaacctgagggaatctatcgtgtga
DBGET
integrated database retrieval system
