Solanum dulcamara (climbing nightshade): 129871323
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Entry
129871323 CDS
T09577
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03420
Nucleotide excision repair
sdul04120
Ubiquitin mediated proteolysis
sdul04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129871323
04120 Ubiquitin mediated proteolysis
129871323
09124 Replication and repair
03420 Nucleotide excision repair
129871323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129871323
03400 DNA repair and recombination proteins [BR:
sdul03400
]
129871323
Enzymes [BR:
sdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
129871323
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
129871323
Multi subunit type E3
SCF complex
Ring finger protein
129871323
Cul2 complex
129871323
Cul3 complex
129871323
Cul4 complex
129871323
Cul7 complex
129871323
Cul8 complex
129871323
Cul9 complex
129871323
DNA repair and recombination proteins [BR:
sdul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
129871323
TCR (transcription coupled repair) factors
Cul4-CSA complex
129871323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
129871323
NCBI-ProteinID:
XP_055802197
LinkDB
All DBs
Position
10:complement(1169463..1172981)
Genome browser
AA seq
116 aa
AA seq
DB search
MASPDNDVLMVPAGEGTTGVGTSNKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDL
CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaccggataatgacgtgctgatggttcccgccggcgagggtactaccggagtt
ggaacgtctaataaaaagccaaagcgatttgagatcaaaaagtggaacgctgtttctctc
tgggcttgggatattgtggtagataactgtgcaatctgtaggaatcacattatggatctg
tgtatcgagtgtcaagctaatcaggctagcgcaacaagtgaggaatgcacagttgcttgg
ggggtttgcaaccatgcattccacttccattgcattagtaggtggctcaagactcgtcaa
gtgtgtccacttgataacagcgagtgggagtttcagaagtacggtcactag
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