KEGG   Solanum dulcamara (climbing nightshade): 129871323
Entry
129871323         CDS       T09577                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03420  Nucleotide excision repair
sdul04120  Ubiquitin mediated proteolysis
sdul04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    129871323
   04120 Ubiquitin mediated proteolysis
    129871323
  09124 Replication and repair
   03420 Nucleotide excision repair
    129871323
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sdul04121]
    129871323
   03400 DNA repair and recombination proteins [BR:sdul03400]
    129871323
Enzymes [BR:sdul01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     129871323
Ubiquitin system [BR:sdul04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   129871323
  Multi subunit type E3
   SCF complex
    Ring finger protein
     129871323
   Cul2 complex
     129871323
   Cul3 complex
     129871323
   Cul4 complex
     129871323
   Cul7 complex
     129871323
   Cul8 complex
     129871323
   Cul9 complex
     129871323
DNA repair and recombination proteins [BR:sdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      129871323
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      129871323
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 129871323
NCBI-ProteinID: XP_055802197
LinkDB
Position
10:complement(1169463..1172981)
AA seq 116 aa
MASPDNDVLMVPAGEGTTGVGTSNKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDL
CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 351 nt   +upstreamnt  +downstreamnt
atggcgtcaccggataatgacgtgctgatggttcccgccggcgagggtactaccggagtt
ggaacgtctaataaaaagccaaagcgatttgagatcaaaaagtggaacgctgtttctctc
tgggcttgggatattgtggtagataactgtgcaatctgtaggaatcacattatggatctg
tgtatcgagtgtcaagctaatcaggctagcgcaacaagtgaggaatgcacagttgcttgg
ggggtttgcaaccatgcattccacttccattgcattagtaggtggctcaagactcgtcaa
gtgtgtccacttgataacagcgagtgggagtttcagaagtacggtcactag

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