Solanum dulcamara (climbing nightshade): 129873645
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Entry
129873645 CDS
T09577
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein At4g19900
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00601
Glycosphingolipid biosynthesis - lacto and neolacto series
sdul00603
Glycosphingolipid biosynthesis - globo and isoglobo series
sdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
129873645
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
129873645
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sdul01003
]
129873645
Enzymes [BR:
sdul01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
129873645
Glycosyltransferases [BR:
sdul01003
]
Glycan extension
P blood group
129873645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
Caps_synth
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
129873645
NCBI-ProteinID:
XP_055804748
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All DBs
Position
11:48271068..48273021
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AA seq
450 aa
AA seq
DB search
MKKETFLXFQEKAMDVVICNTVKKRSLYAIVSCFLLILLAYNSSTVFYVQVPVPANSSPE
ISSFLTENVARKSRKLVSLSSSAKLSSSVIYAVKEETPLVKPNTQLIISRKNPNLVGFTY
KSMAYRPRRRRKKKSLVKVLPSEARINVFSMRMKEFFGSKSSNSSCKFRFFMTWISSIES
FGERELFAVESLFKAHPNGCLVIMSTSMDSPRGMQVLNSFLEKGLRVTAISPDFMYLFKN
TIAQAWIDSLMKGNIDPGEVSLGQNLSNLLRLGLLYKFGGIYLDTDVIVLKSFGKLRNVI
GAQTIDVETRNWSRLNNAVMIFDKRHPLLYKFIEEFALTFDGNKWGHNGPYLVSRVVSRV
SGRDGYNFTVLPPMAFYPVDWNRIGSLFLGPRNETQSKWLLLKLQQIQSGSLAVHLWNKQ
SRELEVEEGSIIQHIMSDCCVFCNSYSSKL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggagacatttttangtttccaagaaaaggctatggatgttgtcatttgtaat
actgttaagaagaggtctttatatgcaattgtttcttgttttctccttattctcttagct
tacaacagttccactgtgttctacgttcaagtccccgttccggccaactcctcgccggag
atttcaagctttttaactgaaaatgtcgccagaaaatcaagaaagttggtgtctttatct
tcttcggctaaactttcatcttctgtgatatatgctgtaaaagaagaaaccccacttgta
aaaccaaacacccagttgataatttcccgtaaaaatccaaacttggtgggttttacatat
aaatcaatggcgtatcgacctagaagaaggaggaagaagaagtctttggtgaaagttctt
ccttcagaggcaagaatcaatgtgttttcaatgagaatgaaggagttttttggttctaaa
tcatccaattcttcctgtaagtttcgatttttcatgacttggatttcttccattgaatct
tttggtgaaagggaactgtttgctgtagagagtttgttcaaggcacacccaaatggctgt
ttggtcattatgtccacttcaatggattctccaagagggatgcaagttttaaactctttc
ttggagaaaggattaagggtaactgcaatttcacctgatttcatgtacttgtttaaaaat
actattgctcaagcctggattgatagtttaatgaagggtaatatagacccaggggaagtt
tctttaggtcagaacctctcaaatttgttaagacttggtttactctataagtttggtggg
atttatttggatactgatgttatagtgttgaagagttttgggaagctaaggaatgttatt
ggggctcaaactattgatgttgaaacaagaaattggagcaggttaaataatgctgtcatg
atttttgataagaggcatcctttgttgtacaagttcattgaagaatttgcacttacattt
gatgggaacaaatggggtcataatggcccttatttggtttcaagggttgtgtcaagggta
agtggaagagatggatacaatttcactgttttgcccccaatggctttttatccagttgat
tggaataggattggtagtctctttcttgggccgaggaacgagactcagtcgaaatggtta
ctcttgaaactccagcagattcagagcggaagtttggcagtgcatctctggaacaagcag
agtcgagagcttgaggttgaagaaggaagcataattcaacatataatgtcagattgttgt
gttttctgcaattcttactcatcaaagttgtaa
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