Solanum dulcamara (climbing nightshade): 129880704
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Entry
129880704 CDS
T09577
Name
(RefSeq) DNA repair protein RAD16-like isoform X1
KO
K15083
DNA repair protein RAD16
Organism
sdul
Solanum dulcamara (climbing nightshade)
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdul03400
]
129880704
DNA repair and recombination proteins [BR:
sdul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
129880704
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4_2
ResIII
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-C3HC4_3
DEAD
zf-RING_2
zf-C3HC4_4
NMB0537_N
Motif
Other DBs
NCBI-GeneID:
129880704
NCBI-ProteinID:
XP_055810851
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Position
2:73199697..73217541
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AA seq
898 aa
AA seq
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MRLRSRPSSSSARGEQSCQYQDSSDEDDVLFIASDSDYIGSSDEDEVVNLLDEAQANGVL
DSNLKVVCSNKTKRNGGQKSIETKEDQVEEEEHADWVLNEIGGGGEVDAGYFQLMGRIDD
RKKNREKNKKKRPTLMWEIWEEDNDRWMAENYTNDLDFNSQNELVTETAKPPSDLIMPLL
RYQKEWLAWALKQEESTARGGILADEMGMGKTVQAIALVLAKRELGQAISDSSLLSPAPC
TSQELPAVKGTLVICPVVAVIQWVSEIDRFTTKGSNKILVYHGANREKNIDKFAEYDFVI
TTYSTVEAEYRKNVMPPKQKCQWCGKSFYEQKLSVHQKYFCGPDAVKTAKQSKQQSKPGG
KTSMLKKNSTESDLKIDTGKRGRGKGIKRKSETDAGSVDDSACVGQDMSMRKSVLHSVKW
NRIILDEAHYVKDRRCNTTRAILVLESSYKWALSGTPLQNRVGELYSLVRFLQIVPYSYY
FCKDCDCRVLDYSSSECPHCPHKSVRHFCWWNRYIASPIQSQGNHGTGRDAMVLLKHKIL
KSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYTSLYNESQAQFNTYIQAGTLMN
NYAHIFDLLTRLRQAVDHPYLVVYSSTALARRGSTNDAGYVEQPCGLCHDPVEDPVVTSC
THVFCKSCLINFSASVGQVSCPSCSKPLTVDFTANDKGDQKSKVTIKGFRSSSILNRIHL
DDFQTSTKIEALREEIRFMIERDGSAKAIVFSQFTSFLDLIHYSLQKSGISCVQLDGSMS
ITARDSAITRFTQDPDCRIFLMSLKAGGVALNLTVASQVFLMDPWWNPAVERQAQDRIHR
IGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSSEALGKLTEADLKFLFVT
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgaggctccgttctcgtccttcatcgtcttccgccagaggagaacaaagctgccaatat
caggacagctctgatgaggatgacgttctttttatagcctcggattctgattacattgga
agcagtgatgaagatgaagtagttaatttgttggacgaagcccaagctaatggagttctt
gatagtaatttaaaagtggtatgttccaataaaacaaaaagaaatgggggccaaaagagt
attgaaacaaaagaagatcaggtagaagaagaggaacatgcagattgggtattgaatgaa
ataggagggggtggtgaagtagatgctggctactttcagttgatggggaggatagatgat
aggaagaagaaccgtgaaaagaataaaaagaagagacccactttgatgtgggagatctgg
gaagaagataacgataggtggatggctgaaaactatacaaatgatctagacttcaatagt
cagaatgagttggtgactgaaactgctaagccaccatctgatttgatcatgcccttgctg
aggtaccagaaagagtggctggcttgggcgttgaagcaagaagaatctactgctagaggc
ggtattcttgctgatgagatggggatggggaagactgttcaagccatagctcttgtgctt
gctaaacgcgaactagggcaagcaatttctgattccagtttgctctcacctgccccttgt
acttcccaggagctccctgcagtgaaaggaaccctagttatatgtcctgttgttgctgtg
attcagtgggtcagtgagattgaccgcttcaccactaaaggaagcaacaaaattcttgtt
tatcatggtgccaacagggagaaaaatattgacaaatttgcggaatatgattttgttatc
actacgtactcaacagtggaggctgagtataggaaaaatgtgatgccaccaaagcaaaaa
tgccagtggtgtggaaagtctttttatgaacaaaagctttctgttcaccagaagtacttt
tgtggaccagatgctgttaaaactgctaaacaatcaaagcaacagagcaagcctggagga
aaaacgtcaatgctgaaaaagaattctactgaaagtgatttaaagattgatacgggtaaa
agaggtcgtggaaagggaataaagcgcaaaagcgaaactgatgctggttctgttgatgat
tcagcctgtgtcggtcaagatatgtccatgaggaagtcagtgttgcactctgtgaagtgg
aatcgtatcattttggatgaggcccattatgtaaaagatagacgctgcaacactaccaga
gctattcttgtgctagaatcatcttataagtgggccttaagtggtactcccctccagaac
cgtgtaggagagctgtactcacttgtccgtttcctgcaaattgttccttactcatactac
ttctgcaaagattgtgattgcagagttctggactatagctcatccgagtgcccacattgc
ccccacaaatctgttcggcacttttgctggtggaatagatatattgcctcacccatacaa
tctcaagggaatcatgggactggtagagatgcgatggttttgttgaaacacaaaattttg
aaaagcatattgctaagacgtactaaaaagggaagggctgctgatcttgcacttcctcca
agaattgttaccttgcggaaagattccttggatgttaaagaagaagactactacacatca
ctgtacaatgaaagccaggcacaatttaatacatacattcaagctggtacattgatgaat
aactatgctcacatttttgatctactcacacgcctgcgacaggcagttgatcatccttac
cttgtggtatactcaagtactgctttagctagaagaggaagcacaaatgatgctggctat
gttgaacaaccatgtggtttatgtcatgatccagtagaagatccagttgttacttcttgc
acacatgtcttttgcaagtcatgtctaataaatttttctgcaagtgtgggacaagtttca
tgcccttcatgttctaagccacttactgtggatttcacggcaaatgataagggggatcag
aaatctaaagtgactatcaaagggtttaggtcctcaagtatactgaacagaattcatctt
gatgatttccagacaagcacaaaaatagaggctttgagagaagaaataaggttcatgatt
gaaagagatggttccgcgaaagcaatagtcttcagtcaatttacatcatttttggatctg
atacactattctctacagaagtcgggcatcagttgtgttcaattagatggatccatgtct
atcactgccagagattctgcaattacaagattcacccaggatccagattgcaggatattc
cttatgagcttgaaagccggaggtgttgccctcaatcttacagtggcatcacaagttttc
ttgatggatccttggtggaatcctgctgtggagcggcaagcccaagatagaatccatcga
atagggcagtataaaccaatcaggattgtgagatttgtgattgagaatacaattgaggag
aggatcttaaagttgcaagagaagaaggagctagtttttgaagggacggtcggtggctct
tctgaggccttggggaaactaacggaggcagacttgaagtttttgtttgtaacctaa
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