Solanum dulcamara (climbing nightshade): 129882683
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Entry
129882683 CDS
T09577
Name
(RefSeq) transcription factor PIF1-like
KO
K16189
phytochrome-interacting factor
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
129882683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdul03000
]
129882683
Transcription factors [BR:
sdul03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
129882683
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
129882683
NCBI-ProteinID:
XP_055813063
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Position
3:complement(64059354..64071015)
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AA seq
547 aa
AA seq
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MNHSVPDFDMDDDFSIPTSSGLTRTKKSAMAEEEIMELLWQNGQVVMQSQNQRSLKKSHI
GNGSGGGGDAVIPSDQAAGREIRHVEEITPQHLFMQEDEMASWLHYPLDNPSFERDLYSD
LLYPTPSSTVNTAALQRESRMSTLEIRPPPPQPSSAAPVATARRPPIPPPRRSVTDSSNR
FQNFGHFSRLPRARLEPAPANLTKSLTDSTVVDSNETPIAGQESRVSHVADNVVPVPGGN
VGCSTIKSTGTAITSTAIREPVTTCEISMTSSPGGSGDSVSASAEPSAPAPSHKASAAPT
ATEAAADDRKRKGRETDDEGQNEDAEFGSPDTKKQARGSTSTKRSRAAEVHNLSERRRRD
RINEKMKALQELIPRCNKTDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMYPGMQPYM
PPMGMGMGVVMGMEIGMNRPMVPYPPLLPGAAMQNAAAAAQMGPRFPIPPFHLPPVPVPH
PSRMQASGQPDPILNPLVAHNSNQPRLPNFNDPYQQIFGLQQAQVALPQNQPVEQPSNNK
SGSSKEV
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaatcattctgttcctgattttgatatggatgatgacttttctattcctacttcttct
ggtcttaccagaactaagaaatccgcaatggcggaagaggaaatcatggaactactgtgg
caaaatggtcaagtggttatgcagagtcaaaatcaaagatctcttaagaaatctcacatc
ggcaacggcagtggaggcggtggtgatgcggttattccctccgaccaagctgccggtaga
gagatccgtcatgtagaggaaattactccacagcatctgtttatgcaggaggatgagatg
gcctcatggcttcactacccactcgataacccctccttcgaacgtgatctctactccgat
ctcttatatcccacgccgagttctaccgtaaacaccgccgcgctgcagcgagaaagccgt
atgtctacgttggagatccgtccacctccgccacaaccatcgtcggcagcgccggtcgca
acggctcgtcggccgcctatacctcctcctagacgctccgttacagatagttcaaatcgg
ttccagaactttggacacttctcgcgattgcctagagcaaggttagaacctgctccggca
aatttgaccaagtcactgacagattcaacggtggtggattcaaatgaaactccaattgca
ggacaggaatctagagtttcacacgtagccgataatgtagtaccagttcctggcggaaat
gtaggatgtagtactataaaaagcaccggaactgcgattacgtcaacggcaattagggaa
ccggtgactacatgtgagatttcgatgacgtcatctccgggtggctcaggagatagtgta
agcgccagtgccgaaccatcagcaccagcaccgtcgcataaggcctcggcggcaccaacg
gcaacggaagcagcagcggatgatcggaaacggaaaggaagagaaacggacgacgaaggt
cagaatgaggatgctgaatttgggtctcctgatacaaaaaagcaagcacgcggttcaaca
tctacaaagcgatctcgtgctgcggaggtccataatctttccgaaaggagacgtagagac
agaataaatgagaagatgaaggccctgcaggaactcataccacgctgtaacaagacggac
aaagcttcaatgcttgatgaggcaattgagtatttgaaatcactgcaattgcaagtgcag
atgatgtccatgggatgtggcatggtcccgatgatgtatcctggaatgcagccgtacatg
ccgcctatgggaatgggcatgggtgtggtgatgggtatggagattggcatgaacaggcca
atggtgccatatccacctctattaccaggtgcagcgatgcagaatgcagctgcagcagca
caaatgggtcctagatttcctatcccaccatttcatttgccaccagttccagtaccacat
ccatccagaatgcaagcctcaggtcagccagatccaattctaaatccacttgttgcacat
aattcgaaccagccaagacttccgaattttaatgatccatatcagcagatttttggtctc
cagcaggcgcaagtcgcattaccgcagaatcagccagtagaacagcccagtaacaataaa
tccggcagcagcaaagaagtttga
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