Solanum dulcamara (climbing nightshade): 129884977
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Entry
129884977 CDS
T09577
Name
(RefSeq) peroxisomal fatty acid beta-oxidation multifunctional protein MFP2-like isoform X1
KO
K10527
enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [EC:
4.2.1.17
1.1.1.35
1.1.1.211
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00071
Fatty acid degradation
sdul00592
alpha-Linolenic acid metabolism
sdul01100
Metabolic pathways
sdul01110
Biosynthesis of secondary metabolites
sdul01212
Fatty acid metabolism
Module
sdul_M00087
beta-Oxidation
sdul_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
129884977
00592 alpha-Linolenic acid metabolism
129884977
Enzymes [BR:
sdul01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
129884977
1.1.1.211 long-chain-3-hydroxyacyl-CoA dehydrogenase
129884977
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
129884977
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
F420_oxidored
Motif
Other DBs
NCBI-GeneID:
129884977
NCBI-ProteinID:
XP_055815207
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Position
4:complement(35348266..35354720)
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AA seq
727 aa
AA seq
DB search
MKSKGRATIEVGADGVAVITINNPPVNSLSLDVLYSLKETFEEAFRRDDVKAIVITGYHG
KFSGGFNISSFADLQQGKVAQPKPGYISLDMLTDTVEVSKKPLVAAIDGHALGGGLEIAM
CCHARISTTNAKLGLPELHLGIIPGFGGTQRLPRLVGLAKSLEMMLTAKTVKGDEALDLG
LVDAIVSSNQLLDTARKWALDIWEHKRPWNIASLYRTDKMESLGEAREILKFARAQAIRI
APNLYHPLAYVDVVEEGIVSGPRAGLIKEYETFEVLIRSATCKALVHIFFAQRGTMRVPG
VTDLGLVPRHVKKVGILGGGLMGSGIATALLLSNYPVILKEVNDKVLEAGIERIKANLQS
RVNKRKLSQEKFEKVLFLLIGTLDYESFGDVDMVIEAVTEDLSLKKQIFTDLEKYCPPHC
ILASNTSTIDLNLIGEKRKSPDRIIGAHFFSPAHVMPLLEIVRTQKTSPQVIVDLLDVGK
KIKKTPVVVRNCTDFAVNRMFFPCTQAALWLVEHGADIYCIDKAFTKFGMAMGPFRLFDL
VGFNVAIASEAQFVSSMPDRIKSMLIPLMQQDKRLGETTRKGFYLYDERRKANPDPEIKK
YIEKAREISDVSIDPKLEKLSYKDIIEMIFFPLVNEACRLLAEGIAVKASDLDIASVMGM
GFPPYRGGIIYWADTLGSKYICSRLDEWARIYGNFFKPCDYLAEKAARGFPLVSIIMGCI
HYVVLLN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcaaagggtagagctaccattgaggttggagctgatggagttgctgtcatcacc
attaataaccctcctgtcaattctctttcattagatgttttgtacagcttgaaagagaca
tttgaggaagcctttaggagagatgatgtgaaggcaattgttattacaggttatcatggc
aagttctctggtggttttaatatctcttcctttgctgacctacaacaaggaaaagtggca
caaccaaaacctggttatatatctctggatatgctcactgacactgtagaagtttcaaaa
aaacctttagtagcggcgattgatggtcatgctttgggtggaggacttgaaattgcaatg
tgttgtcatgctcggatttccactacgaatgcaaaacttggattgccagaacttcacctt
ggtataattcctggatttggaggtactcagaggcttccacgcctcgtgggacttgctaag
tccctagaaatgatgctaacagcaaaaactgttaaaggggatgaagctcttgaccttggc
cttgttgatgctatagtttcatcgaaccaattattggatactgctcgtaaatgggcactt
gatatatgggagcacaaaagaccttggaatattgccagtctttacagaactgacaagatg
gagtctcttggtgaggcaagggaaatacttaagtttgctagagctcaagccattagaata
gctccaaatctctatcatcccttagcatacgttgatgttgttgaagagggtatagtgtcc
ggtccacgtgctggacttattaaggagtatgaaacattcgaagttcttatacgttcagcc
acttgcaaggccttagtccacattttctttgcccaacgcggaaccatgagggttccaggg
gtcactgatttggggttagtgccacgacacgttaaaaaggttggaattcttggaggtgga
ttaatgggttctggaattgcaacagcattgctccttagcaactatcctgtgatcctgaaa
gaagtaaatgacaaagtcctagaggctgggattgagagaattaaagcaaatttgcaaagc
cgcgtcaacaaaagaaaattgagtcaagagaagtttgaaaaagttctcttcctactcatt
ggtactcttgattatgagagcttcggagatgttgacatggtcattgaggctgtcacagag
gacttatctttaaagaagcaaatatttacggatttagagaagtactgccctccacattgt
atacttgctagtaatacctctacaattgacttgaatttgattggggagaagagaaaatct
ccggatcgtattattggagctcactttttcagtcctgctcatgttatgccacttctggaa
attgttcgcacccaaaagacatctccacaagtaattgtagacttgcttgatgttggaaag
aagataaagaaaaccccagtagtagtaaggaactgcactgattttgctgtcaataggatg
ttctttccttgcacccaagctgctctttggcttgtcgaacatggagcagacatatactgc
atcgataaagccttcactaaatttggaatggctatgggccctttcaggttgtttgatctt
gttggtttcaatgttgcaattgctagtgaagctcaatttgtatcgagcatgcccgacaga
attaagtcaatgcttattccactaatgcaacaagataaaagattaggtgaaacgactcga
aaaggcttctacttatatgatgaaagacgcaaagccaatcctgatccagaaattaagaaa
tacattgagaaggcaagagaaatttctgatgtcagcattgatcctaagctggaaaaactc
tcgtacaaggacatcattgaaatgatttttttccctctagttaatgaagcatgtagatta
cttgctgaaggcattgctgtcaaagcttctgatcttgacattgcttctgtcatgggcatg
ggatttcctccttacaggggagggatcatatactgggcagatactcttggatccaaatac
atttgttcaagattggatgagtgggcaagaatttatggaaactttttcaagccatgcgac
taccttgctgaaaaagctgctagggggtttcctctggtgagtataataatgggatgcata
cattatgttgttcttctaaattga
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