Solanum dulcamara (climbing nightshade): 129889444
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Entry
129889444 CDS
T09577
Name
(RefSeq) tocopherol cyclase, chloroplastic
KO
K09834
tocopherol cyclase [EC:
5.5.1.24
]
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul00130
Ubiquinone and other terpenoid-quinone biosynthesis
sdul01100
Metabolic pathways
sdul01110
Biosynthesis of secondary metabolites
sdul01240
Biosynthesis of cofactors
Module
sdul_M00112
Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
129889444
Enzymes [BR:
sdul01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.24 tocopherol cyclase
129889444
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GFIT
Motif
Pfam:
Tocopherol_cycl
Motif
Other DBs
NCBI-GeneID:
129889444
NCBI-ProteinID:
XP_055820712
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Position
5:67720926..67729405
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AA seq
509 aa
AA seq
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MESISSFSAISPISKNIGFSRTRIDCVTSITNGELFSFKNLNNYSSTILKRQYQKSRHAF
VVKAVAGADSSVETKKKENRELVKPVYSSTPPNRPLRTPHSGYHFDGSTRKFFEGWFFKV
SIPECRQSFCFMYSVESPSFTKKLSSFEELQYGPRFTGVGAQILGADDKYICQYSEESSN
FWGSRHELMLGNTFIAQNSAKPPNKEVRPQEFNRCVTEGFQVTPLWHQGSIRDDGRTDYT
EIVKTASWEYSTRPIYGWGDVNSKQKSTAGWPAAFPVFEPHWQVCMAAGLSTGWIEWDGQ
RFEFQNAPSYSEKNWGGSFPRKWFWVQCSVFEGAIGDVALTAGGGLRLLPGLNETFESVA
LIGIHYGGIFYEFVPWNASISWEVTPWGKWNISAENEKHMVELEATTEDSGTTLRAPTEE
MGLAPACRDTCFGDLRLQLWERKSNGSKGKVILDVTSNMAGLEVGGGPWFNTWKAKAEMP
EIVTRVINAPVDLDGILSCVPPLLKPPGL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggagagcatttctagtttttccgccatttctccaatttccaaaaatattggattttct
aggactaggattgattgtgtaacttcaattacaaatggggaacttttttctttcaagaat
ttgaacaattattcatctactatcctgaagcgacagtatcaaaaatcaagacatgcattt
gtagtcaaagcagtggcaggagctgattcatctgtcgaaaccaaaaagaaggaaaatagg
gagcttgtgaaaccggtttactcttctacgcctcctaatcgtcctcttcgaactcctcac
agcgggtaccattttgatggaagtaccagaaaattctttgaaggttggttctttaaggta
tcaattccagagtgtagacagagtttctgctttatgtattctgtagagagtccttcattt
accaagaaattaagcagctttgaggagctgcaatatgggcctcggtttactggtgtggga
gctcaaattcttggtgcagatgacaagtatatttgtcaatatagtgaagagtcttcaaac
ttctggggaagtaggcatgaactgatgcttggcaacaccttcattgcccaaaatagtgcg
aagcctccaaataaggaagttcgcccacaggagtttaatcgctgtgtcacagagggtttt
caagttaccccactttggcatcaaggatctattcgcgatgacgggaggacagattatact
gaaattgtgaaaactgctagctgggagtatagcacgcggcccatttatggatggggcgat
gttaactcaaagcagaagtccacggcaggatggcctgctgcttttcctgtatttgagcca
cattggcaagtatgcatggcagctggactttccacaggctggatagagtgggatggtcag
cggtttgagtttcaaaatgctccttcttactccgaaaagaactggggtggttccttccca
agaaagtggttttgggtccagtgcagtgtctttgaaggtgcaattggagatgttgctttg
accgctggtggtggattaaggctacttccgggattgaatgagacttttgaaagtgttgct
ctgataggaattcactatggaggtattttctatgaatttgttccatggaatgctagtatt
agttgggaagttactccctggggtaaatggaatatatctgcggagaatgagaaacatatg
gtagaactagaagcaacaacagaagattctggtaccacattgcgggctcctacagaagag
atgggtctcgctcctgcatgtagagacacttgtttcggtgaccttagactgcagttgtgg
gaacggaagagtaatgggagtaaaggaaaggttattttggatgttacaagcaatatggca
ggtctagaagttgggggagggccatggttcaacacatggaaggcaaaagcagagatgccg
gaaattgttactcgagttatcaatgctcctgtggatttggatggcatattgagctgtgtt
cctccacttctcaaacctcctggcctttga
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