KEGG   Solanum dulcamara (climbing nightshade): 129899417
Entry
129899417         CDS       T09577                                 
Name
(RefSeq) uncharacterized protein LOC129899417
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
sdul  Solanum dulcamara (climbing nightshade)
Pathway
sdul03420  Nucleotide excision repair
sdul04120  Ubiquitin mediated proteolysis
sdul04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sdul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    129899417
   04120 Ubiquitin mediated proteolysis
    129899417
  09124 Replication and repair
   03420 Nucleotide excision repair
    129899417
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sdul04121]
    129899417
   03400 DNA repair and recombination proteins [BR:sdul03400]
    129899417
Enzymes [BR:sdul01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     129899417
Ubiquitin system [BR:sdul04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   129899417
  Multi subunit type E3
   SCF complex
    Ring finger protein
     129899417
   Cul2 complex
     129899417
   Cul3 complex
     129899417
   Cul4 complex
     129899417
   Cul7 complex
     129899417
   Cul8 complex
     129899417
   Cul9 complex
     129899417
DNA repair and recombination proteins [BR:sdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      129899417
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      129899417
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_11
Other DBs
NCBI-GeneID: 129899417
NCBI-ProteinID: XP_055830354
LinkDB
Position
8:complement(68330607..68335053)
AA seq 117 aa
MSAEVEMAPADEGSTVAVPSCCSSTKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMD
LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 354 nt   +upstreamnt  +downstreamnt
atgtctgcagaagtcgagatggctcccgccgatgaaggatcaaccgttgccgtgccttca
tgctgttcttctacgaagaaacccaagcgttttgagatcaaaaagtggaacgctgtctct
ttatgggcttgggatattgttgtagacaactgtgctatttgcaggaaccatatcatggac
ctctgcatcgaatgtcaagctaatcaagctagtgccactagcgaggagtgcactgttgcc
tggggtgtatgtaatcatgccttccactttcactgcattagtcgatggctcaaaacccgt
caagtgtgcccattagataacagtgagtgggagtttcagaagtatggtcactag

DBGET integrated database retrieval system