Solanum dulcamara (climbing nightshade): 129900445
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Entry
129900445 CDS
T09577
Name
(RefSeq) transcription factor PIF7-like
KO
K16189
phytochrome-interacting factor
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
129900445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdul03000
]
129900445
Transcription factors [BR:
sdul03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
129900445
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
DUF6800
HAD_2
Motif
Other DBs
NCBI-GeneID:
129900445
NCBI-ProteinID:
XP_055831390
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All DBs
Position
8:71136826..71139402
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AA seq
406 aa
AA seq
DB search
MSHHTWNFYHQKQEQVVEKEEEENRYPRGHVHNQQNQFQVDPNPMSNKSEVAELTWENGQ
VAMHRLGSNLPNEQTKHTWEKAGDTLESIVHQATFQKHNHSNIMGSDGQNQANINRDKNA
FYGCQQTRGVLKRMRSSDSDPQLYGGGITVELSAHASAKDNDIPMVTWPCNEDSAFHGGS
ENKEEEPETKSSNLSKRSRRAAVHNQSERRRRDRINEKMKALQKFVPNASKTDKASMLEE
VIKYLKQLQAQVQLISNARNMEQQMMMMSLGMQSHIQMPLLAGMGMCSTAGMLNNMTANL
ARAPYPSPLIYPTSSSIPTLCPPFMSPDFAMASSIPTPSQPNRDSISPTITKSAAAPNIA
TNSFPFNHPYNAFLPQSMKMEFNNEMAAQYLQQANQENVNIQGQKE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatcatacttggaatttttatcaccaaaaacaagaacaagtagtagaaaaagaa
gaagaggagaacagatatcctcgcggccacgtgcataatcagcagaatcagtttcaagtt
gaccccaatcccatgtccaataagtctgaagttgcagagttaacatgggaaaatgggcaa
gtagccatgcatagacttggaagcaacctccccaatgagcaaacaaaacacacatgggaa
aaggctggtgacacactagaatcaattgtgcatcaagccactttccaaaaacacaatcat
agtaatataatgggaagtgatggccaaaatcaggcaaacatcaacagggacaaaaatgca
ttttatggttgtcaacaaacaagaggtgtactaaagaggatgagatcatcagattctgac
cctcaattatatggtggtggaataacagtagaacttagcgctcacgcaagtgctaaggac
aatgatatccccatggtaacatggccttgtaatgaggattctgccttccatggtggctcg
gaaaacaaggaggaagaacctgaaacaaaaagctccaacctgtcaaaacgcagtcgaaga
gctgctgttcataaccagtcagagaggagacgccgtgatagaatcaacgaaaagatgaaa
gctctacagaagtttgtgccaaatgcaagtaagacagataaagcatcaatgctggaggaa
gtgataaagtacttaaagcagcttcaagcacaagttcaattgataagcaatgctagaaat
atggagcagcaaatgatgatgatgtctctcggaatgcaatcacatattcaaatgccttta
ctagcaggaatgggcatgtgtagtactgcaggaatgcttaacaatatgactgctaattta
gctcgagctccttatccgtctcccctcatttatccaacctcttcatcaattcccactctt
tgtcctcccttcatgtcaccagacttcgccatggcatcatcaattcctactccatcacaa
cctaaccgcgattccatcagccccacaatcaccaaatctgcagctgcccccaatattgca
accaattcattcccttttaaccacccctataatgcatttctacctcaatcaatgaagatg
gagttcaataatgagatggcagcccaatatctgcagcaggccaatcaagaaaatgtcaat
atccaagggcaaaaagaatga
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