Solanum dulcamara (climbing nightshade): 129901072
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Entry
129901072 CDS
T09577
Name
(RefSeq) transcription factor PIF1-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
129901072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sdul03000
]
129901072
Transcription factors [BR:
sdul03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
129901072
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
DUF5667
Motif
Other DBs
NCBI-GeneID:
129901072
NCBI-ProteinID:
XP_055832166
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All DBs
Position
8:2073019..2082214
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AA seq
536 aa
AA seq
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MPHKMNYCVVPDFKMDDDYPNIPSTIFNTSKKSTIADEEIMELIWQNGQVTMQSQNQRSV
RKSHLFSEQSAVEETAAASSPLFIQEDEMASWLQSPLEDSSIDDFLYTTLSCAAAPPREI
GTSTVEIRQPPVPPSGRTIASSPRPIIPQLRCTEGELPDRLQNLGHFSRLPNEASLRNGT
TSTSSHSVRASKIIDSNETPVAAIPEYMVARVSDNVTPDSAVNARGVEMTATATATATAT
SSGCRGVTTASELTLTTSTSGSGDSVSASAEPPHPSHKEAAHAAADDRKRKGRESDDNEG
LSEDVEFEFADARKQVRSSTSAKKSRAAEVHNLSERKRRDRINEKMKALQELIPRCNKSD
KASMLDEAIEYLKSLQLQVQMMSTGCSMVPMMYPGIPQYMPTMGMNMGMGTNMEMGMHRP
MVPYTPLMPGQAIRNAAAAAQMAPQYPLPAYHLPPFPAPDPSRIPVENQPDPPRLNSHAE
HNINQPRLPNLIDPYHQYFGLQQAQLMLTQNQGVEQPSSSKPNSCIEGSAENHQSG
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgcctcataagatgaattactgcgttgttcctgatttcaaaatggatgatgattatcct
aatattccttctacaattttcaacacatcaaagaaatccaccatagcagatgaagaaatc
atggagctaatatggcaaaatggtcaagtaactatgcaaagccaaaatcaaagatctgta
aggaaatctcaccttttttccgagcaatccgccgtagaagaaacggcagcagcttcatct
ccactgtttatacaagaggatgaaatggcctcttggcttcaatctccacttgaagattcc
tccatcgacgattttctatatactacgctgagctgcgccgcagcaccgccgagagaaatt
ggtacttcaacggtggagatccgtcagcctccggttccgccttctggaagaacgattgca
tcgtctccacggccgattatacctcaattgagatgtactgagggtgaattaccagatcga
ttgcagaatttggggcatttttcacggttgcctaatgaagcaagtttacgaaatggtact
acatcaacttcaagtcactcggttagggcatcgaagattatagattcaaacgagactccg
gtcgcagcaatacctgaatatatggttgcacgcgtatcagataatgtaacaccagattcc
gccgtgaatgccagaggtgtggaaatgacggcgacggcgacggcgacggcgacggcgaca
agcagcggctgtaggggagtgacaacggcaagcgagttgacgttgacaacatctacaagt
ggctcaggagatagtgtaagcgccagtgcagaaccgccacatccgtcgcataaggaggcg
gcgcatgcggcggcggacgatcggaaacggaaaggtagagaatcggatgacaatgaaggt
ctaagcgaggatgttgagtttgagtttgctgatgcaaggaagcaagttagaagttctaca
tccgcaaagaaatctcgcgcagcagaggtccataatctttctgaaaggaaacgccgagat
agaataaatgagaagatgaaggctctacaagaactcataccacgttgcaacaagtcagac
aaagcttcaatgctggatgaagcaattgagtaccttaaatcattgcaattgcaagtacag
atgatgtccacgggatgcagcatggtccctatgatgtatcctggcatcccgcaatacatg
ccaacaatgggaatgaatatgggtatggggacgaatatggaaatgggcatgcaccggcca
atggtgccatatacgccactaatgccaggtcaagcaatacggaatgcagctgcagcagca
caaatggctcctcaatatcctcttccggcatatcatttgccaccatttcctgcacctgat
ccatccagaatcccagttgagaaccagccagatcctccgaggctaaactcacatgctgaa
cataatattaatcagccaagacttccgaatttaattgatccatatcatcaatattttggt
ctacagcaggcacaactgatgctaacccagaatcagggagtggaacagccgagcagcagt
aaaccaaacagctgcatagaaggaagtgcagagaatcatcaatctggttga
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