Solanum dulcamara (climbing nightshade): 129904038
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Entry
129904038 CDS
T09577
Name
(RefSeq) uncharacterized protein LOC129904038
KO
K12173
BRCA1-A complex subunit BRE
Organism
sdul
Solanum dulcamara (climbing nightshade)
Pathway
sdul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129904038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sdul04121
]
129904038
03036 Chromosome and associated proteins [BR:
sdul03036
]
129904038
03400 DNA repair and recombination proteins [BR:
sdul03400
]
129904038
Ubiquitin system [BR:
sdul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
129904038
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
129904038
Chromosome and associated proteins [BR:
sdul03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
129904038
DNA repair and recombination proteins [BR:
sdul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
129904038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
Motif
Other DBs
NCBI-GeneID:
129904038
NCBI-ProteinID:
XP_055835541
LinkDB
All DBs
Position
9:1410046..1415179
Genome browser
AA seq
378 aa
AA seq
DB search
MAIDAIPPLIAAQLNYLVTNTPFSVKIENMWSGGKNIGLLDRFSLVIPFCLDYIKWDVIY
NGVYPLAPPDVIFGAEDETFRPYHGRSDASDSKSLKNPLTEWNNRDPTRLFSLVLQLREL
YKAYQKKRVEEVDDERLKFEISTMLSREGIEMSLSSNIDKPEEVKFAVPLLDLDLNKMVA
GSIWRHPQKIYLQVIYPVGRKYSSSPSAPRLKLVSSPELKTVFSIDDFRLPAWLDGMCMA
EYLPTLEEILESQIKDAVASIESRRKLIVALVPLFGRPVEADPVFCRKATFLSSSGVFTF
LVHVAIPLQFPKQQPSLMLQSSQHFNSQGLPIKSPVTTECPWSPRWETSDMAERIFDFIV
EECLNFKKYCNESMLQNR
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgacgcaatccctccactcatcgctgcacagctgaattacctagtcactaac
actccgttctctgttaagatagagaatatgtggtcaggaggcaaaaacattggtctgctt
gatcgattctccttagtaatccccttttgcctggattacatcaaatgggacgtgatatac
aatggtgtgtatccgttagcaccaccagatgttatatttggggcggaagatgaaactttt
cgaccctatcatggtcgtagtgatgctagtgactcaaagtcattgaagaatcctcttact
gaatggaataatagagacccgactcgtcttttttctctggttctgcagctcagggagttg
tacaaggcataccaaaagaaaagagttgaagaagttgatgatgaaaggttgaagtttgaa
atcagcacaatgctctcgagagagggtattgaaatgtctttgagttcaaatattgataag
ccagaagaggttaaattcgctgtcccgctgctggatttggatttaaacaaaatggttgcg
ggatccatttggcgccatccgcagaagatatacctacaggttatatatccagttggcagg
aaatactccagttctccttctgccccacgtttgaaattggtttcttctcctgaattgaag
actgtcttctcaattgatgatttcaggcttcctgcatggttggatggaatgtgcatggct
gagtaccttccgactttagaagagatacttgaatcacagattaaagatgcagttgcatcc
attgaaagtagaaggaagctcattgtggcattagttcctctttttggaaggccagtggaa
gcagatccagttttctgcaggaaggcgacctttctatcttcctcgggggtatttactttt
ctggttcatgttgccatcccacttcagttccctaagcagcagccaagtttgatgcttcag
agttcccagcacttcaattctcaaggtcttcccatcaagtctccggtcactactgaatgc
ccgtggagtcccagatgggaaacatcagatatggctgagcgtatctttgatttcattgta
gaagaatgcttgaatttcaagaaatattgcaacgaatccatgcttcagaaccgatga
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