KEGG   Shigella dysenteriae Sd197: SDY_0093
Entry
SDY_0093          CDS       T00306                                 
Symbol
yabJ
Name
(GenBank) putative ATP-binding component of a transport system
  KO
K02062  thiamine transport system ATP-binding protein [EC:7.6.2.15]
Organism
sdy  Shigella dysenteriae Sd197
Pathway
sdy02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:sdy00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    SDY_0093 (yabJ)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sdy02000]
    SDY_0093 (yabJ)
Enzymes [BR:sdy01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.15  ABC-type thiamine transporter
     SDY_0093 (yabJ)
Transporters [BR:sdy02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Thiamine transporter
    SDY_0093 (yabJ)
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_29 AAA_16 RsgA_GTPase nSTAND1 HUTI_composite_bact MMR_HSR1 AAA_22 AAA_23 SbcC_Walker_B NACHT ATP-synt_ab AAA AAA_5 AAA_28 AAA_25 Dynamin_N AAA_24 DUF87 AAA_30 RNA_helicase
Other DBs
NCBI-ProteinID: ABB60329
ShiBASE_China: SDY0093
UniProt: Q32K28
LinkDB
Position
complement(92698..93396)
AA seq 232 aa
MLKLTDITWLYQHLPMRFSLTVERGEQVAILGPSGTGKSTLLNLIAGFLTPASGSLTIDG
VDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQQEKMHAIARQMGID
NLMARLPGELSGGQRQRVALARCLVRKQPILLLDEPFSALDPALRQEMLTLVSTSCQQQK
MTLLMVSHSVEDAARIATRSVVVADGRIAWQGKTEELLSGKASASALLGITG
NT seq 699 nt   +upstreamnt  +downstreamnt
atgttaaaactgactgatatcacctggctttaccaacatttgccgatgcgttttagctta
acggtggaacgcggcgagcaggtggcgatcctcgggccaagcggcacgggtaaaagtacc
ctgctgaatttgatcgccggttttctgacgccagccagcggttcgctgactatcgatggc
gttgatcacaccacgacgccgccgtcacgccgtccggtgtcgatgctgtttcaggagaac
aacctgttcagccacctgacggtcgcgcagaacatcgggctggggctaaatccgggattg
aaactgaacgcggcacagcaggagaaaatgcacgctatcgcccgccagatggggattgat
aatttaatggcgcggttacctggcgagctttccggcggtcagcgacagcgagtggcgtta
gcgcgttgtctggtacgcaaacagccgattttattgctcgatgaaccgttctctgcgctc
gatccggcgttacgtcaggagatgttgacgctggtgagcacgagctgccagcagcaaaaa
atgacgctattgatggtgtcgcacagcgtggaagatgcggcgcggatcgccacgcgctcg
gtagtagtcgccgacgggcgcatcgcctggcagggtaagaccgaagaattgttgagcggt
aaggcgagtgcttcggcgctgttgggaattacaggttaa

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