Symmachiella dynata: Mal52_00310
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Entry
Mal52_00310 CDS
T06944
Symbol
metH
Name
(GenBank) Methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
sdyn
Symmachiella dynata
Pathway
sdyn00270
Cysteine and methionine metabolism
sdyn00450
Selenocompound metabolism
sdyn00670
One carbon pool by folate
sdyn01100
Metabolic pathways
sdyn01110
Biosynthesis of secondary metabolites
sdyn01230
Biosynthesis of amino acids
sdyn04980
Cobalamin transport and metabolism
sdyn04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sdyn00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Mal52_00310 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Mal52_00310 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Mal52_00310 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Mal52_00310 (metH)
04980 Cobalamin transport and metabolism
Mal52_00310 (metH)
Enzymes [BR:
sdyn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
Mal52_00310 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
OKR_DC_1_N
HemY_N
Motif
Other DBs
NCBI-ProteinID:
QDU41578
UniProt:
A0A517ZGH5
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Position
41204..44905
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AA seq
1233 aa
AA seq
DB search
MTAVSDTAAQLRELLQQRILVLDGAMGSLILAERPSEEDYRGARFADHHSDLKNCNDILV
LTQPAMIEGIHRQYLEAGADIILTDTFNANGVSLKEYDLEQYTYELNKTAVEIARRATEE
FTELTPDKPRFVAGSIGPMNRSLSVSPDVNDPGKRLVTFDEVVEGYTEQLRGLIDGGADI
LLPETAFDTLNMKACLFAIDKYFREHDVSLPVMISGTITDDSGRTMTGQTIEAFWTSISH
FDMLSIGLNCALGPEKMRPYLESISQIAPFYVSCYPNAGLPNEMGEFDMTPAEMAKTLRE
FADNGWLNIVGGCCGSTPAHIRKIADAVADIRPRPVPTVSKCSTYSGLELLEIRPETNFI
MIGERTNVTGSRKFARLIKEEKYDEALSVARDQVEGGANMIDINMDEGLIDSAAVMAKFL
NLVAAEPDISRVPIMIDSSKWSVIEAGLKCVQGKAVVNSISLKEGEELFLEQARKIHAYG
AAAVVMAFDEEGQAADAQRKVEICKRAYDLLTQKIGFPAEDIIFDANILTVGTGMEEHAN
YAVEFIEAVRQIKQQCPGAKTSGGVSNVSFSFRGNNVVREAINAAFLYHAISAGLDMGIV
NAGQLEVYEEIEPTLLEYVEDVLLNRREDATERLIDYAEQIKDQATGQAEVKTAAWREES
VEERLKHALLKGITDFIDEDTEEARQKYSRPLHVIQGPLMDGMAVVGELFGTGKMFLPQV
VKSARVMKRSVAYLTPYMEQEKIDLGIADEKARGTMVIATVKGDVHDIGKNIVAVVLRCN
NFDIVDLGVMVAADKIIDKAIEIGADLIGLSGLITPSLDEMAHVAKEMQRRGLKIPLIVG
GATTSAKHTAVKIATQYDQIVAHVGDASLSVPVMENILDTDKKAEFDAKNRAAQQRDREM
FAARQQKKLISYDEAVAARFPTDWSSAEIQQPSFTGTKVLKDFPLEKIVPFIDWSPFFQT
WELRGKYPKILDDPNMGVEARKLFDSAQESLAELIAGKQLHAAGVYGFWPANSVGDDIVL
YTDESRSEEVTRFHTLRQQWERKGQEHYFALSDFIAPLESGRIDYLGAFAVTAGLGIGPI
VAKCEAELDDYQSIMTKALADRLAEAFAELLHQQARRDWGFGAVEELSSDDLIAEKYRGI
RPAPGYPACPDHTEKRILFDLLDAEAQTGIELTENFAMLPAAAVSGLYFAHPQARYFSVD
RITKDQAEAYAARKGMPLAEVERWLSPNLGYEA
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgtttccgataccgccgctcaacttcgtgagttgttgcaacagcgaattctc
gtacttgacggtgcgatggggtcgttgattctcgccgaacgtcccagtgaagaggattat
cgcggcgcgcggtttgccgatcaccatagtgatttgaaaaactgcaacgatattctggtg
ctcacacagccggcgatgatcgaagggattcatcggcaatatcttgaagcgggcgcggat
attattctgacggataccttcaatgccaacggggtctcgctgaaagaatacgacctagag
caatacacctacgaactcaacaagacggcggtagaaatcgcgcggcgggcgaccgaagag
ttcacggagttgacgcctgacaaacctcgtttcgtcgccggcagcatcggtcccatgaac
cggtcgttgtcggtctccccggatgtgaacgatcccggcaaacggttggtgaccttcgac
gaagtggttgagggatacaccgagcaactgcgggggttgatcgatggtggagcggatatt
ttgttgccggaaacggcgtttgatacgttgaacatgaaggcttgcctgttcgcgatcgat
aagtattttcgcgaacacgatgtcagcctaccggtgatgatttccgggacgatcaccgac
gatagcggtcgcacgatgaccggccaaacgatcgaggcgttttggaccagcatctcgcat
ttcgacatgctcagtattgggttgaactgcgcgctcggtccggagaagatgcggccctac
ttggagtcgatttcgcagattgcgccgttctacgtgagttgttaccccaatgcggggctg
cccaatgaaatgggcgaattcgatatgacgcctgcggagatggccaagacgctgcgagaa
ttcgctgacaatggttggttgaacatcgtgggtggttgttgcggcagcacaccggcgcac
atccgcaaaatcgccgacgcggtcgctgacattcgaccccgaccggttccgacagtttcc
aagtgttcgacctacagcggcttggaactgctggagattcgtcctgagacgaacttcatc
atgatcggcgagcggaccaacgtcaccggttcgcgaaagtttgcgcggctgatcaaggag
gaaaaatacgacgaagcgctcagtgtcgctcgcgatcaggtcgaggggggcgcgaacatg
atcgacatcaacatggatgaaggtctgatcgacagtgcagcagtgatggccaagttcttg
aatcttgtcgccgctgagccagatatctcccgcgtaccgatcatgatcgacagttccaaa
tggtcggtcatcgaagcgggcttgaaatgcgtgcaaggcaaagcggtcgtaaattcaatc
agcctcaaggagggggaagagctctttttggagcaggcgcgtaaaattcatgcctacggc
gccgccgctgttgtgatggcgtttgatgaagaaggccaagcggccgatgcgcagcggaaa
gtcgaaatctgcaaacgtgcctatgacctgctgacacaaaaaatcggtttcccggctgag
gacatcatcttcgatgccaacattctgaccgtcggaacggggatggaagagcatgccaac
tatgctgtcgaatttattgaagcggtccgacagatcaaacaacaatgtcccggtgcgaag
acttccggcggcgtgagtaatgtttcgttctcgtttcgcggcaataacgttgtccgcgaa
gccatcaacgcggcgtttttgtatcacgcgatttcggccgggttggacatgggcatcgtc
aatgccggccaattggaggtctatgaagaaatcgagccgacgttgttggagtacgtcgaa
gatgtgctgctcaatcgccgtgaggatgcgacggagcggctgattgattacgccgagcag
atcaaggatcaagcgacaggtcaggccgaagtgaaaacggccgcttggcgcgaggaatcg
gttgaggaacggctcaagcatgcattgctcaaaggcattaccgattttattgacgaagat
acagaagaagcccggcaaaaatacagccgcccgctgcacgtgattcagggaccgttgatg
gacggtatggcggtcgtgggtgagctatttggtaccggaaaaatgttcttgccgcaggtc
gttaaaagtgcccgcgtgatgaaacgctcagtggcctacctgacgccgtatatggagcaa
gagaaaattgatctgggcatcgcggacgaaaaagcccgcggcacgatggtgattgccacc
gtcaaaggggacgtacacgatattggcaaaaacatcgtggcggtcgtgctgcgctgtaac
aactttgacatcgtcgacctaggcgtgatggtcgcagctgacaaaatcattgacaaggcg
atcgaaatcggcgccgacctgattggactgagcggattgattacaccgtcgctcgacgag
atggcgcacgttgccaaggagatgcagcggcgtggattgaagattccgttgattgtcggt
ggagcgacgacgagtgcgaaacatacggccgttaaaattgcgacgcaatacgatcagatc
gttgcgcatgtgggcgatgcgtcgctgtcggtgccggtgatggaaaacattctcgataca
gataagaaggcggagttcgatgcgaagaaccgcgctgcccaacagcgtgaccgcgaaatg
tttgccgcacggcagcaaaagaaactgatttcatatgacgaagcggtcgcggcgcgattt
cccacggattggtcgagtgccgaaatccaacaaccgagttttaccggcaccaaggtgctg
aaagattttccgttggagaagatcgttccctttatcgactggtcaccctttttccagacc
tgggaactgcgcggcaagtatcccaaaatcctcgacgacccgaacatgggcgtcgaggcg
cgtaagttgttcgactcggcccaggaatccttggcggaattgattgccgggaaacaactg
catgcggcgggtgtgtatggtttttggccggccaattccgtgggcgatgacatcgtgctc
tacaccgacgaatcccgcagcgaggaggtcacgcggttccatacgctgcggcaacaatgg
gagcggaaggggcaggagcattattttgcgctgtctgatttcatcgctccgctggagagc
ggccgcatcgattacctgggggcctttgctgtgacggctggtttgggaattggtccgatc
gtggcaaaatgtgaagcggaactcgacgactatcaatcgatcatgaccaaggcgctggcg
gatcgcttggcggaggcgtttgccgagttgctgcaccagcaagcgcggcgggattgggga
tttggagctgtcgaggaactatcgagcgacgatttgattgccgagaaataccgcggcatc
cgacccgcgccgggttaccccgcctgccccgaccatacagagaagcggattttgtttgat
ctgctcgatgcggaagcgcagacgggtatcgaactgacggaaaacttcgccatgcttccc
gcagcggctgtgtcgggactgtacttcgcgcatccgcaggcacggtatttctccgtcgac
cggattaccaaagatcaagccgaagcgtacgctgctcgcaaggggatgccgttggcggaa
gttgagcgttggttgtcgccgaatttggggtatgaggcgtag
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