Symmachiella dynata: Mal52_06620
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Entry
Mal52_06620 CDS
T06944
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sdyn
Symmachiella dynata
Pathway
sdyn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sdyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mal52_06620 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdyn03400
]
Mal52_06620 (pdg)
Enzymes [BR:
sdyn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Mal52_06620 (pdg)
DNA repair and recombination proteins [BR:
sdyn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Mal52_06620 (pdg)
Prokaryotic type
Mal52_06620 (pdg)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
EndIII_4Fe-2S
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QDU42207
UniProt:
A0A517ZIA5
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All DBs
Position
complement(838064..838738)
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AA seq
224 aa
AA seq
DB search
MPKSESTDSDVARKQQGRKILRALKKKYPLAECSLTHDNSFQLLVAVILSAQCTDARVNM
VVPKLFDKFPTPEALAGASQKQVEKIIHSLGFFRAKATNLRGMAKALVEEHDGEVPQTLD
ELTALPGVGRKTANVVLGNAFDIPSGFVVDTHVKRISRLLGLTKKTNPDQIERDLTRLLP
KSSWIETPHRLIFLGREICIARRPQCAECPLLKCCDRTGLPPLN
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagtccgaatctaccgacagcgatgttgccaggaagcaacaaggccgcaaaatc
ctgcgtgccttaaagaagaaatatcccctggccgagtgcagcctgacgcacgataactcc
tttcaattgctggtggcggtgattctctccgcccagtgcaccgatgcacgggtgaacatg
gtcgtcccgaagttattcgacaagttccccacccccgaagccctggccggcgcgtcgcag
aaacaggtggagaagatcattcattcactgggtttctttcgcgccaaagccaccaacctg
cgcgggatggccaaggcgcttgtggaagaacatgacggcgaagttcctcagaccttggac
gaattgaccgctttgccgggcgtcggccgtaaaacggctaacgtggttttgggaaatgcg
tttgatatccccagcggattcgttgtcgacacgcacgtcaaacgcatcagccgcctgttg
gggctgaccaaaaaaacgaaccccgatcagatcgaacgagacctcacacggttgttgccg
aaatcgagttggatcgaaacgccgcaccggttgatttttctgggacgtgaaatctgcatc
gcccgccgcccacaatgcgcggaatgccccctgctcaaatgctgcgaccgcaccggcttg
ccgccgctcaactga
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