Salmonella enterica subsp. enterica serovar Choleraesuis: SCH_2884
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Entry
SCH_2884 CDS
T00240
Symbol
ygcF
Name
(GenBank) putative Organic radical activating enzymes
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
sec
Salmonella enterica subsp. enterica serovar Choleraesuis
Pathway
sec00790
Folate biosynthesis
sec01100
Metabolic pathways
Module
sec_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
sec00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
SCH_2884 (ygcF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sec03016
]
SCH_2884 (ygcF)
Enzymes [BR:
sec01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
SCH_2884 (ygcF)
Transfer RNA biogenesis [BR:
sec03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SCH_2884 (ygcF)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AAX66790
UniProt:
Q57KH2
LinkDB
All DBs
Position
complement(3049995..3050666)
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AA seq
223 aa
AA seq
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MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAK
TKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETS
GTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALGELLATLSD
DKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacccgattaacgagatgttccagaccctacaaggcgagggttattttaccggc
gtccccgctatttttattcgtttacagggatgtccggtcggctgtgcctggtgcgatacc
aaacacacctgggataaactgagcgatcgggaagtgtctctgttcagcattctggcaaaa
accaaagagagcgacaaatggggtgctgcgagcagtgaagacttgctggcagtaattaat
cgtcagggctataccgcgcgtcacgttgtcatcaccggtggagaaccctgtattcacgac
ctcatgccgctcaccgatctgcttgaaaagagtggttttagttgtcagattgagaccagc
gggacgcacgaagtgcgctgtacgcctaacacctgggtcacggtttcaccaaaagtgaat
atgcgcgggggatatgacgtgctttcccaggcgctggagcgcgccaatgaaatcaagcat
cccgttgggcgagttcgtgatattgaggcgctgggtgaactgttagccacgttgagcgat
gataaaccgcgcgtgattgctttgcagcccattagccagaaagaagacgcgacgcgtctg
tgtattgaaacgtgtattgcacgtaactggcggctgtctatgcaaacgcataaatattta
aatattgcctga
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